Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 ACTG1P14-201ENST00000446382 1122 ntBASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 AC011467.4-201ENST00000594891 528 ntBASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 AL353135.1-201ENST00000606729 504 ntBASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 AL096828.2-201ENST00000567259 1965 ntBASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HCFC2Q9Y5Z7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 AC074386.1-202ENST00000463561 864 ntBASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.41■□□□□ 0.54
HCFC2Q9Y5Z7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
HCFC2Q9Y5Z7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HCFC2Q9Y5Z7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HCFC2Q9Y5Z7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HCFC2Q9Y5Z7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HCFC2Q9Y5Z7 AC009336.1-201ENST00000608941 1553 ntBASIC18.4■□□□□ 0.54
HCFC2Q9Y5Z7 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.4■□□□□ 0.54
HCFC2Q9Y5Z7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HCFC2Q9Y5Z7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.4■□□□□ 0.54
HCFC2Q9Y5Z7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.4■□□□□ 0.54
HCFC2Q9Y5Z7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HCFC2Q9Y5Z7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HCFC2Q9Y5Z7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.4■□□□□ 0.54
HCFC2Q9Y5Z7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.4■□□□□ 0.54
HCFC2Q9Y5Z7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.4■□□□□ 0.54
HCFC2Q9Y5Z7 AC091812.2-201ENST00000619081 385 ntBASIC18.4■□□□□ 0.54
HCFC2Q9Y5Z7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HCFC2Q9Y5Z7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HCFC2Q9Y5Z7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HCFC2Q9Y5Z7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
HCFC2Q9Y5Z7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HCFC2Q9Y5Z7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.4■□□□□ 0.54
HCFC2Q9Y5Z7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HCFC2Q9Y5Z7 BX276092.7-203ENST00000637198 1536 ntBASIC18.39■□□□□ 0.54
HCFC2Q9Y5Z7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 AC100803.2-201ENST00000562459 1963 ntBASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms