Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
LEMD3Q9Y2U8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LEMD3Q9Y2U8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LEMD3Q9Y2U8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.41■■□□□ 1.02
LEMD3Q9Y2U8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LEMD3Q9Y2U8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
LEMD3Q9Y2U8 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LEMD3Q9Y2U8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LEMD3Q9Y2U8 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC21.41■■□□□ 1.02
LEMD3Q9Y2U8 RPS8P6-201ENST00000426177 609 ntBASIC21.41■■□□□ 1.02
LEMD3Q9Y2U8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC21.41■■□□□ 1.02
LEMD3Q9Y2U8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC21.41■■□□□ 1.02
LEMD3Q9Y2U8 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC21.41■■□□□ 1.02
LEMD3Q9Y2U8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.41■■□□□ 1.02
LEMD3Q9Y2U8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
LEMD3Q9Y2U8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LEMD3Q9Y2U8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
LEMD3Q9Y2U8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.41■■□□□ 1.02
LEMD3Q9Y2U8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LEMD3Q9Y2U8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.41■■□□□ 1.02
LEMD3Q9Y2U8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.41■■□□□ 1.02
LEMD3Q9Y2U8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.41■■□□□ 1.02
LEMD3Q9Y2U8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.41■■□□□ 1.02
LEMD3Q9Y2U8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 KRT18P55-202ENST00000578578 1546 ntBASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 GGCT-205ENST00000409436 954 ntTSL 3 BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 LINC00982-205ENST00000420957 435 ntBASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 AC092865.6-201ENST00000642101 219 ntBASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
LEMD3Q9Y2U8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
LEMD3Q9Y2U8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
LEMD3Q9Y2U8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.02
LEMD3Q9Y2U8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
LEMD3Q9Y2U8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
LEMD3Q9Y2U8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LEMD3Q9Y2U8 AP002414.1-201ENST00000391405 1147 ntBASIC21.39■■□□□ 1.01
LEMD3Q9Y2U8 PTCHD3P3-201ENST00000403073 906 ntBASIC21.39■■□□□ 1.01
LEMD3Q9Y2U8 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC21.39■■□□□ 1.01
LEMD3Q9Y2U8 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC21.39■■□□□ 1.01
LEMD3Q9Y2U8 AC005829.1-201ENST00000570002 483 ntBASIC21.39■■□□□ 1.01
LEMD3Q9Y2U8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC21.39■■□□□ 1.01
LEMD3Q9Y2U8 AC010654.1-201ENST00000615722 808 ntBASIC21.39■■□□□ 1.01
LEMD3Q9Y2U8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.39■■□□□ 1.01
LEMD3Q9Y2U8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
LEMD3Q9Y2U8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
LEMD3Q9Y2U8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LEMD3Q9Y2U8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.39■■□□□ 1.01
LEMD3Q9Y2U8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LEMD3Q9Y2U8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LEMD3Q9Y2U8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LEMD3Q9Y2U8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LEMD3Q9Y2U8 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
LEMD3Q9Y2U8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.38■■□□□ 1.01
LEMD3Q9Y2U8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
LEMD3Q9Y2U8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LEMD3Q9Y2U8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
LEMD3Q9Y2U8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LEMD3Q9Y2U8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
LEMD3Q9Y2U8 AC098818.2-201ENST00000564925 2320 ntBASIC21.38■■□□□ 1.01
LEMD3Q9Y2U8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LEMD3Q9Y2U8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LEMD3Q9Y2U8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LEMD3Q9Y2U8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LEMD3Q9Y2U8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
LEMD3Q9Y2U8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LEMD3Q9Y2U8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
LEMD3Q9Y2U8 MRPL20P1-201ENST00000400819 433 ntBASIC21.38■■□□□ 1.01
LEMD3Q9Y2U8 AC211486.1-202ENST00000416371 468 ntBASIC21.38■■□□□ 1.01
LEMD3Q9Y2U8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC21.38■■□□□ 1.01
LEMD3Q9Y2U8 AC211476.1-201ENST00000503899 468 ntBASIC21.38■■□□□ 1.01
LEMD3Q9Y2U8 YBX1P5-201ENST00000509441 847 ntBASIC21.38■■□□□ 1.01
LEMD3Q9Y2U8 GGTLC5P-201ENST00000617623 998 ntBASIC21.38■■□□□ 1.01
LEMD3Q9Y2U8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms