Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH9Q9ULB4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH9Q9ULB4 AC002558.1-201ENST00000488906 803 ntBASIC18.71■□□□□ 0.59
CDH9Q9ULB4 RNPS1P1-201ENST00000507437 918 ntBASIC18.71■□□□□ 0.59
CDH9Q9ULB4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.71■□□□□ 0.59
CDH9Q9ULB4 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH9Q9ULB4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH9Q9ULB4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.71■□□□□ 0.59
CDH9Q9ULB4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH9Q9ULB4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.71■□□□□ 0.59
CDH9Q9ULB4 NKAPP1-205ENST00000585790 367 ntBASIC18.71■□□□□ 0.59
CDH9Q9ULB4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
CDH9Q9ULB4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH9Q9ULB4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH9Q9ULB4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH9Q9ULB4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.71■□□□□ 0.59
CDH9Q9ULB4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH9Q9ULB4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 AC005104.2-201ENST00000427818 678 ntBASIC18.7■□□□□ 0.58
CDH9Q9ULB4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 AC018712.1-201ENST00000455767 687 ntBASIC18.7■□□□□ 0.58
CDH9Q9ULB4 IGHV3-52-201ENST00000519770 353 ntBASIC18.7■□□□□ 0.58
CDH9Q9ULB4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 AL773604.1-201ENST00000617417 272 ntBASIC18.7■□□□□ 0.58
CDH9Q9ULB4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 AC073592.4-201ENST00000623827 446 ntBASIC18.7■□□□□ 0.58
CDH9Q9ULB4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
CDH9Q9ULB4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH9Q9ULB4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CDH9Q9ULB4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH9Q9ULB4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.69■□□□□ 0.58
CDH9Q9ULB4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH9Q9ULB4 SIGLEC16-201ENST00000599858 1437 ntBASIC18.69■□□□□ 0.58
CDH9Q9ULB4 NEFHP1-201ENST00000412845 2629 ntBASIC18.69■□□□□ 0.58
CDH9Q9ULB4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH9Q9ULB4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH9Q9ULB4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH9Q9ULB4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH9Q9ULB4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH9Q9ULB4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH9Q9ULB4 SPDYE21P-201ENST00000413323 827 ntBASIC18.69■□□□□ 0.58
CDH9Q9ULB4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH9Q9ULB4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.69■□□□□ 0.58
CDH9Q9ULB4 AC021087.4-201ENST00000563761 564 ntBASIC18.69■□□□□ 0.58
CDH9Q9ULB4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH9Q9ULB4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH9Q9ULB4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH9Q9ULB4 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.69■□□□□ 0.58
CDH9Q9ULB4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CDH9Q9ULB4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH9Q9ULB4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH9Q9ULB4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH9Q9ULB4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.68■□□□□ 0.58
CDH9Q9ULB4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.68■□□□□ 0.58
CDH9Q9ULB4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH9Q9ULB4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH9Q9ULB4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.68■□□□□ 0.58
CDH9Q9ULB4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.68■□□□□ 0.58
CDH9Q9ULB4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH9Q9ULB4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.68■□□□□ 0.58
CDH9Q9ULB4 AC132938.5-201ENST00000624980 1813 ntBASIC18.68■□□□□ 0.58
CDH9Q9ULB4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH9Q9ULB4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH9Q9ULB4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CDH9Q9ULB4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CDH9Q9ULB4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH9Q9ULB4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CDH9Q9ULB4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms