Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRNA9Q9UGM1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRNA9Q9UGM1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA9Q9UGM1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA9Q9UGM1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA9Q9UGM1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA9Q9UGM1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNA9Q9UGM1 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRNA9Q9UGM1 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNA9Q9UGM1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA9Q9UGM1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.19■□□□□ 0.18
CHRNA9Q9UGM1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRNA9Q9UGM1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA9Q9UGM1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA9Q9UGM1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CHRNA9Q9UGM1 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CHRNA9Q9UGM1 FZD10-202ENST00000539839 3282 ntBASIC16.19■□□□□ 0.18
CHRNA9Q9UGM1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CHRNA9Q9UGM1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA9Q9UGM1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNA9Q9UGM1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNA9Q9UGM1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 AC141586.5-201ENST00000624546 2050 ntBASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 KRT8P47-201ENST00000604727 1398 ntBASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 AL592071.1-201ENST00000611956 408 ntBASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 AP000550.4-202ENST00000639755 178 ntBASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.18■□□□□ 0.18
CHRNA9Q9UGM1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 AC091076.1-201ENST00000610741 619 ntBASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 IGHV3-41-201ENST00000613121 348 ntBASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 AC124864.1-201ENST00000623408 392 ntBASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 AL358472.4-201ENST00000633140 710 ntBASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CHRNA9Q9UGM1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms