Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
DNMT3BQ9UBC3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
DNMT3BQ9UBC3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.42■□□□□ 0.54
DNMT3BQ9UBC3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.42■□□□□ 0.54
DNMT3BQ9UBC3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.42■□□□□ 0.54
DNMT3BQ9UBC3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.42■□□□□ 0.54
DNMT3BQ9UBC3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.42■□□□□ 0.54
DNMT3BQ9UBC3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.42■□□□□ 0.54
DNMT3BQ9UBC3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.42■□□□□ 0.54
DNMT3BQ9UBC3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.42■□□□□ 0.54
DNMT3BQ9UBC3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
DNMT3BQ9UBC3 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
DNMT3BQ9UBC3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
DNMT3BQ9UBC3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DNMT3BQ9UBC3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
DNMT3BQ9UBC3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.42■□□□□ 0.54
DNMT3BQ9UBC3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.42■□□□□ 0.54
DNMT3BQ9UBC3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
DNMT3BQ9UBC3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DNMT3BQ9UBC3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.42■□□□□ 0.54
DNMT3BQ9UBC3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
DNMT3BQ9UBC3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DNMT3BQ9UBC3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DNMT3BQ9UBC3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 AC019129.2-201ENST00000609837 1235 ntBASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 AC009113.1-201ENST00000570267 2443 ntBASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3BQ9UBC3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 KLF4P1-201ENST00000412782 1185 ntBASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 AC079781.4-201ENST00000641908 219 ntBASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DNMT3BQ9UBC3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms