Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KLHL1Q9NR64 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KLHL1Q9NR64 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.73■□□□□ 0.27
KLHL1Q9NR64 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KLHL1Q9NR64 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KLHL1Q9NR64 AC233702.3-201ENST00000578656 1387 ntBASIC16.73■□□□□ 0.27
KLHL1Q9NR64 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.73■□□□□ 0.27
KLHL1Q9NR64 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KLHL1Q9NR64 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KLHL1Q9NR64 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KLHL1Q9NR64 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KLHL1Q9NR64 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KLHL1Q9NR64 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KLHL1Q9NR64 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KLHL1Q9NR64 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL1Q9NR64 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL1Q9NR64 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.72■□□□□ 0.27
KLHL1Q9NR64 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
KLHL1Q9NR64 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL1Q9NR64 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL1Q9NR64 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.72■□□□□ 0.27
KLHL1Q9NR64 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL1Q9NR64 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL1Q9NR64 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL1Q9NR64 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.72■□□□□ 0.27
KLHL1Q9NR64 MIR149-201ENST00000384879 89 ntBASIC16.72■□□□□ 0.27
KLHL1Q9NR64 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL1Q9NR64 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.72■□□□□ 0.27
KLHL1Q9NR64 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.72■□□□□ 0.27
KLHL1Q9NR64 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.72■□□□□ 0.27
KLHL1Q9NR64 AC091304.2-201ENST00000564639 760 ntBASIC16.72■□□□□ 0.27
KLHL1Q9NR64 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
KLHL1Q9NR64 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.72■□□□□ 0.27
KLHL1Q9NR64 Z69720.1-201ENST00000601483 472 ntBASIC16.72■□□□□ 0.27
KLHL1Q9NR64 AC099336.1-202ENST00000602961 463 ntBASIC16.72■□□□□ 0.27
KLHL1Q9NR64 AL121772.3-201ENST00000610840 674 ntBASIC16.72■□□□□ 0.27
KLHL1Q9NR64 AC004263.2-201ENST00000617183 678 ntBASIC16.72■□□□□ 0.27
KLHL1Q9NR64 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
KLHL1Q9NR64 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL1Q9NR64 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL1Q9NR64 AC009102.3-201ENST00000623118 1491 ntBASIC16.72■□□□□ 0.27
KLHL1Q9NR64 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL1Q9NR64 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL1Q9NR64 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
KLHL1Q9NR64 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
KLHL1Q9NR64 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL1Q9NR64 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KLHL1Q9NR64 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 LINC01711-201ENST00000598340 967 ntBASIC16.71■□□□□ 0.27
KLHL1Q9NR64 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 MYLKP1-201ENST00000509077 1580 ntBASIC16.71■□□□□ 0.27
KLHL1Q9NR64 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KLHL1Q9NR64 AC135776.1-201ENST00000319817 2481 ntBASIC16.71■□□□□ 0.26
KLHL1Q9NR64 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 AC246785.2-201ENST00000432512 513 ntBASIC16.7■□□□□ 0.26
KLHL1Q9NR64 VENTXP7-201ENST00000475503 772 ntBASIC16.7■□□□□ 0.26
KLHL1Q9NR64 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.7■□□□□ 0.26
KLHL1Q9NR64 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms