Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.02■□□□□ 0.32
NECTIN3Q9NQS3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.02■□□□□ 0.32
NECTIN3Q9NQS3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NECTIN3Q9NQS3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.02■□□□□ 0.31
NECTIN3Q9NQS3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.02■□□□□ 0.31
NECTIN3Q9NQS3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NECTIN3Q9NQS3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NECTIN3Q9NQS3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NECTIN3Q9NQS3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
NECTIN3Q9NQS3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
NECTIN3Q9NQS3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NECTIN3Q9NQS3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NECTIN3Q9NQS3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NECTIN3Q9NQS3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NECTIN3Q9NQS3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NECTIN3Q9NQS3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 LINC00602-201ENST00000629776 2065 ntBASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 TSSC2-201ENST00000450217 709 ntBASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 AC093677.2-201ENST00000600169 1863 ntBASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NECTIN3Q9NQS3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NECTIN3Q9NQS3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NECTIN3Q9NQS3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NECTIN3Q9NQS3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NECTIN3Q9NQS3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NECTIN3Q9NQS3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
NECTIN3Q9NQS3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17■□□□□ 0.31
NECTIN3Q9NQS3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NECTIN3Q9NQS3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17■□□□□ 0.31
NECTIN3Q9NQS3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NECTIN3Q9NQS3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17■□□□□ 0.31
NECTIN3Q9NQS3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17■□□□□ 0.31
NECTIN3Q9NQS3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17■□□□□ 0.31
NECTIN3Q9NQS3 AP002383.4-201ENST00000442518 975 ntBASIC17■□□□□ 0.31
NECTIN3Q9NQS3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17■□□□□ 0.31
NECTIN3Q9NQS3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17■□□□□ 0.31
NECTIN3Q9NQS3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17■□□□□ 0.31
NECTIN3Q9NQS3 LINC00167-201ENST00000530583 1419 ntBASIC17■□□□□ 0.31
NECTIN3Q9NQS3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17■□□□□ 0.31
NECTIN3Q9NQS3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17■□□□□ 0.31
NECTIN3Q9NQS3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17■□□□□ 0.31
NECTIN3Q9NQS3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NECTIN3Q9NQS3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
NECTIN3Q9NQS3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17■□□□□ 0.31
NECTIN3Q9NQS3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17■□□□□ 0.31
NECTIN3Q9NQS3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17■□□□□ 0.31
NECTIN3Q9NQS3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NECTIN3Q9NQS3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17■□□□□ 0.31
NECTIN3Q9NQS3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.99■□□□□ 0.31
NECTIN3Q9NQS3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
NECTIN3Q9NQS3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
NECTIN3Q9NQS3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.99■□□□□ 0.31
NECTIN3Q9NQS3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
NECTIN3Q9NQS3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
NECTIN3Q9NQS3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.99■□□□□ 0.31
NECTIN3Q9NQS3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
NECTIN3Q9NQS3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NECTIN3Q9NQS3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NECTIN3Q9NQS3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NECTIN3Q9NQS3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.99■□□□□ 0.31
NECTIN3Q9NQS3 CHCHD2P8-201ENST00000429873 447 ntBASIC16.99■□□□□ 0.31
NECTIN3Q9NQS3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NECTIN3Q9NQS3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NECTIN3Q9NQS3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.99■□□□□ 0.31
NECTIN3Q9NQS3 NPAP1P7-201ENST00000613027 823 ntBASIC16.99■□□□□ 0.31
NECTIN3Q9NQS3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NECTIN3Q9NQS3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms