Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LRRC40Q9H9A6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
LRRC40Q9H9A6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 AL023806.1-201ENST00000603994 1649 ntBASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.01■□□□□ 0.47
LRRC40Q9H9A6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18■□□□□ 0.47
LRRC40Q9H9A6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18■□□□□ 0.47
LRRC40Q9H9A6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
LRRC40Q9H9A6 AC108860.2-201ENST00000562760 2183 ntBASIC18■□□□□ 0.47
LRRC40Q9H9A6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18■□□□□ 0.47
LRRC40Q9H9A6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
LRRC40Q9H9A6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18■□□□□ 0.47
LRRC40Q9H9A6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC40Q9H9A6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
LRRC40Q9H9A6 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC40Q9H9A6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
LRRC40Q9H9A6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC40Q9H9A6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC40Q9H9A6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC40Q9H9A6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18■□□□□ 0.47
LRRC40Q9H9A6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18■□□□□ 0.47
LRRC40Q9H9A6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18■□□□□ 0.47
LRRC40Q9H9A6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC40Q9H9A6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18■□□□□ 0.47
LRRC40Q9H9A6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18■□□□□ 0.47
LRRC40Q9H9A6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
LRRC40Q9H9A6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC40Q9H9A6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC40Q9H9A6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC40Q9H9A6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18■□□□□ 0.47
LRRC40Q9H9A6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC40Q9H9A6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC40Q9H9A6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
LRRC40Q9H9A6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18■□□□□ 0.47
LRRC40Q9H9A6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18■□□□□ 0.47
LRRC40Q9H9A6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
LRRC40Q9H9A6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.99■□□□□ 0.47
LRRC40Q9H9A6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC40Q9H9A6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC40Q9H9A6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC40Q9H9A6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC40Q9H9A6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
LRRC40Q9H9A6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC40Q9H9A6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
LRRC40Q9H9A6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC40Q9H9A6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
LRRC40Q9H9A6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
LRRC40Q9H9A6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.99■□□□□ 0.47
LRRC40Q9H9A6 GUSBP12-201ENST00000513727 720 ntBASIC17.99■□□□□ 0.47
LRRC40Q9H9A6 AL136038.3-201ENST00000561909 1096 ntBASIC17.99■□□□□ 0.47
LRRC40Q9H9A6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC40Q9H9A6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC40Q9H9A6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.99■□□□□ 0.47
LRRC40Q9H9A6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC40Q9H9A6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC40Q9H9A6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.99■□□□□ 0.47
LRRC40Q9H9A6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.99■□□□□ 0.47
LRRC40Q9H9A6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC40Q9H9A6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC40Q9H9A6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC40Q9H9A6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC40Q9H9A6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC40Q9H9A6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC40Q9H9A6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC40Q9H9A6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC40Q9H9A6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms