Protein–RNA interactions for Protein: Q9BV40

VAMP8, Vesicle-associated membrane protein 8, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8Q9BV40 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP8Q9BV40 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP8Q9BV40 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
VAMP8Q9BV40 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
VAMP8Q9BV40 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
VAMP8Q9BV40 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP8Q9BV40 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP8Q9BV40 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP8Q9BV40 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP8Q9BV40 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP8Q9BV40 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
VAMP8Q9BV40 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP8Q9BV40 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VAMP8Q9BV40 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC12.98□□□□□ -0.33
VAMP8Q9BV40 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 AC138035.3-201ENST00000622706 2791 ntBASIC12.97□□□□□ -0.33
VAMP8Q9BV40 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 AC091799.1-201ENST00000422823 811 ntBASIC12.97□□□□□ -0.33
VAMP8Q9BV40 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 AC105265.2-201ENST00000467189 838 ntBASIC12.97□□□□□ -0.33
VAMP8Q9BV40 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 AC116351.2-201ENST00000606540 1585 ntBASIC12.97□□□□□ -0.33
VAMP8Q9BV40 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP8Q9BV40 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 AC006058.4-201ENST00000624016 1670 ntBASIC12.96□□□□□ -0.33
VAMP8Q9BV40 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 BEX3-202ENST00000372634 753 ntTSL 2 BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 DUX4L18-201ENST00000553347 1267 ntBASIC12.96□□□□□ -0.33
VAMP8Q9BV40 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP8Q9BV40 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VAMP8Q9BV40 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
VAMP8Q9BV40 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms