Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 UNC93B2-201ENST00000285383 730 ntBASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 AC087499.1-201ENST00000418141 1075 ntBASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 NIFKP9-201ENST00000419265 221 ntBASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 NUDT16P1-203ENST00000513809 620 ntBASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 SDHAP1-207ENST00000440850 2000 ntBASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 LINC00602-201ENST00000629776 2065 ntBASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 MMP23A-201ENST00000234610 1017 ntBASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 C1QL1P1-201ENST00000568105 661 ntBASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NDUFAF3Q9BU61 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
NDUFAF3Q9BU61 AC132872.4-202ENST00000622924 2756 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms