Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.66■□□□□ 0.26
CPPED1Q9BRF8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.66■□□□□ 0.26
CPPED1Q9BRF8 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.66■□□□□ 0.26
CPPED1Q9BRF8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPPED1Q9BRF8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.66■□□□□ 0.26
CPPED1Q9BRF8 AC004263.2-201ENST00000617183 678 ntBASIC16.66■□□□□ 0.26
CPPED1Q9BRF8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.66■□□□□ 0.26
CPPED1Q9BRF8 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPPED1Q9BRF8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPPED1Q9BRF8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPPED1Q9BRF8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPPED1Q9BRF8 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.66■□□□□ 0.26
CPPED1Q9BRF8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPPED1Q9BRF8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CPPED1Q9BRF8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.66■□□□□ 0.26
CPPED1Q9BRF8 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CPPED1Q9BRF8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPPED1Q9BRF8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPPED1Q9BRF8 AC116353.5-201ENST00000638148 1699 ntBASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 LINC01311-201ENST00000565162 1445 ntBASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 AC112698.1-201ENST00000510299 916 ntBASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 MIR4497-201ENST00000583208 89 ntBASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 AL136038.4-201ENST00000603606 1261 ntBASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 AC141257.4-201ENST00000634557 245 ntBASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 AC136944.6-201ENST00000634818 245 ntBASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 AL391807.1-203ENST00000604392 2365 ntBASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPPED1Q9BRF8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CPPED1Q9BRF8 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CPPED1Q9BRF8 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 RASA4DP-201ENST00000460726 1199 ntBASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 AL138966.2-201ENST00000621997 464 ntBASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 AGGF1P2-201ENST00000426656 2106 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms