Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLF1Q9BQI6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SLF1Q9BQI6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
SLF1Q9BQI6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLF1Q9BQI6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLF1Q9BQI6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLF1Q9BQI6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.58■□□□□ 0.89
SLF1Q9BQI6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLF1Q9BQI6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SLF1Q9BQI6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLF1Q9BQI6 PCDHB18P-201ENST00000524813 2368 ntBASIC20.58■□□□□ 0.89
SLF1Q9BQI6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLF1Q9BQI6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.58■□□□□ 0.89
SLF1Q9BQI6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
SLF1Q9BQI6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.58■□□□□ 0.89
SLF1Q9BQI6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SLF1Q9BQI6 AL096828.2-201ENST00000567259 1965 ntBASIC20.58■□□□□ 0.89
SLF1Q9BQI6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLF1Q9BQI6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SLF1Q9BQI6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.58■□□□□ 0.89
SLF1Q9BQI6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.58■□□□□ 0.89
SLF1Q9BQI6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLF1Q9BQI6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLF1Q9BQI6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLF1Q9BQI6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.58■□□□□ 0.89
SLF1Q9BQI6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.58■□□□□ 0.89
SLF1Q9BQI6 AC106730.1-201ENST00000566722 1090 ntBASIC20.58■□□□□ 0.89
SLF1Q9BQI6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLF1Q9BQI6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.58■□□□□ 0.89
SLF1Q9BQI6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SLF1Q9BQI6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLF1Q9BQI6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.58■□□□□ 0.88
SLF1Q9BQI6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
SLF1Q9BQI6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
SLF1Q9BQI6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLF1Q9BQI6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.58■□□□□ 0.88
SLF1Q9BQI6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLF1Q9BQI6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.58■□□□□ 0.88
SLF1Q9BQI6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLF1Q9BQI6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLF1Q9BQI6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.57■□□□□ 0.88
SLF1Q9BQI6 NOC2LP1-202ENST00000452600 2235 ntBASIC20.57■□□□□ 0.88
SLF1Q9BQI6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLF1Q9BQI6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLF1Q9BQI6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLF1Q9BQI6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLF1Q9BQI6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLF1Q9BQI6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLF1Q9BQI6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SLF1Q9BQI6 RPL13AP23-201ENST00000480739 586 ntBASIC20.57■□□□□ 0.88
SLF1Q9BQI6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.57■□□□□ 0.88
SLF1Q9BQI6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.57■□□□□ 0.88
SLF1Q9BQI6 OR7E14P-202ENST00000530490 1290 ntBASIC20.57■□□□□ 0.88
SLF1Q9BQI6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.57■□□□□ 0.88
SLF1Q9BQI6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.57■□□□□ 0.88
SLF1Q9BQI6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLF1Q9BQI6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLF1Q9BQI6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLF1Q9BQI6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLF1Q9BQI6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLF1Q9BQI6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLF1Q9BQI6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SLF1Q9BQI6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLF1Q9BQI6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLF1Q9BQI6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLF1Q9BQI6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLF1Q9BQI6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.56■□□□□ 0.88
SLF1Q9BQI6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.56■□□□□ 0.88
SLF1Q9BQI6 KRT18P58-201ENST00000527480 1120 ntBASIC20.56■□□□□ 0.88
SLF1Q9BQI6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.56■□□□□ 0.88
SLF1Q9BQI6 MTDHP4-201ENST00000600287 670 ntBASIC20.56■□□□□ 0.88
SLF1Q9BQI6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
SLF1Q9BQI6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SLF1Q9BQI6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLF1Q9BQI6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLF1Q9BQI6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLF1Q9BQI6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLF1Q9BQI6 HLA-J-201ENST00000462773 1622 ntBASIC20.56■□□□□ 0.88
SLF1Q9BQI6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLF1Q9BQI6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLF1Q9BQI6 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLF1Q9BQI6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLF1Q9BQI6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
SLF1Q9BQI6 PMPCAP1-201ENST00000508114 1576 ntBASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms