Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.69■□□□□ 0.1
VRK1Q99986 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK1Q99986 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.69■□□□□ 0.1
VRK1Q99986 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
VRK1Q99986 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK1Q99986 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK1Q99986 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VRK1Q99986 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.69■□□□□ 0.1
VRK1Q99986 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
VRK1Q99986 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
VRK1Q99986 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK1Q99986 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK1Q99986 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK1Q99986 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK1Q99986 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK1Q99986 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK1Q99986 MIR662-201ENST00000384847 95 ntBASIC15.69■□□□□ 0.1
VRK1Q99986 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VRK1Q99986 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK1Q99986 PVRIG2P-201ENST00000435460 978 ntBASIC15.69■□□□□ 0.1
VRK1Q99986 AP003733.1-201ENST00000491725 852 ntBASIC15.69■□□□□ 0.1
VRK1Q99986 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.69■□□□□ 0.1
VRK1Q99986 KRT8P26-201ENST00000534154 1276 ntBASIC15.69■□□□□ 0.1
VRK1Q99986 KRT126P-201ENST00000549467 1181 ntBASIC15.69■□□□□ 0.1
VRK1Q99986 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.69■□□□□ 0.1
VRK1Q99986 CLEC4GP1-201ENST00000596555 870 ntBASIC15.69■□□□□ 0.1
VRK1Q99986 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.69■□□□□ 0.1
VRK1Q99986 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.69■□□□□ 0.1
VRK1Q99986 AC016734.2-201ENST00000624325 1377 ntBASIC15.69■□□□□ 0.1
VRK1Q99986 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK1Q99986 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK1Q99986 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
VRK1Q99986 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK1Q99986 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK1Q99986 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.69■□□□□ 0.1
VRK1Q99986 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
VRK1Q99986 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.69■□□□□ 0.1
VRK1Q99986 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
VRK1Q99986 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
VRK1Q99986 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK1Q99986 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
VRK1Q99986 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK1Q99986 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
VRK1Q99986 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VRK1Q99986 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK1Q99986 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.68■□□□□ 0.1
VRK1Q99986 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.68■□□□□ 0.1
VRK1Q99986 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK1Q99986 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK1Q99986 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.68■□□□□ 0.1
VRK1Q99986 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK1Q99986 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VRK1Q99986 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
VRK1Q99986 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK1Q99986 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK1Q99986 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.68■□□□□ 0.1
VRK1Q99986 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
VRK1Q99986 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
VRK1Q99986 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK1Q99986 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK1Q99986 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK1Q99986 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
VRK1Q99986 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.68■□□□□ 0.1
VRK1Q99986 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK1Q99986 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.68■□□□□ 0.1
VRK1Q99986 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.68■□□□□ 0.1
VRK1Q99986 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.68■□□□□ 0.1
VRK1Q99986 MIR3180-4-201ENST00000582223 153 ntBASIC15.68■□□□□ 0.1
VRK1Q99986 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VRK1Q99986 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.68■□□□□ 0.1
VRK1Q99986 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.68■□□□□ 0.1
VRK1Q99986 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.68■□□□□ 0.1
VRK1Q99986 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK1Q99986 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
VRK1Q99986 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK1Q99986 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK1Q99986 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK1Q99986 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VRK1Q99986 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK1Q99986 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VRK1Q99986 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VRK1Q99986 AC012317.2-201ENST00000623305 2251 ntBASIC15.68■□□□□ 0.1
VRK1Q99986 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.67■□□□□ 0.1
VRK1Q99986 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.67■□□□□ 0.1
VRK1Q99986 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.67■□□□□ 0.1
VRK1Q99986 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VRK1Q99986 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VRK1Q99986 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VRK1Q99986 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VRK1Q99986 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VRK1Q99986 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
VRK1Q99986 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
VRK1Q99986 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
VRK1Q99986 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VRK1Q99986 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VRK1Q99986 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.67■□□□□ 0.1
VRK1Q99986 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
VRK1Q99986 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
VRK1Q99986 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VRK1Q99986 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms