Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLCC1Q96S66 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLCC1Q96S66 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCC1Q96S66 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCC1Q96S66 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.98□□□□□ -0.01
CLCC1Q96S66 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.98□□□□□ -0.01
CLCC1Q96S66 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.98□□□□□ -0.01
CLCC1Q96S66 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCC1Q96S66 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCC1Q96S66 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CLCC1Q96S66 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
CLCC1Q96S66 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCC1Q96S66 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CLCC1Q96S66 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCC1Q96S66 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLCC1Q96S66 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.98□□□□□ -0.01
CLCC1Q96S66 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCC1Q96S66 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CLCC1Q96S66 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CLCC1Q96S66 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CLCC1Q96S66 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLCC1Q96S66 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.98□□□□□ -0.01
CLCC1Q96S66 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.98□□□□□ -0.01
CLCC1Q96S66 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCC1Q96S66 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCC1Q96S66 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCC1Q96S66 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CLCC1Q96S66 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLCC1Q96S66 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCC1Q96S66 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CLCC1Q96S66 AL355075.4-201ENST00000554988 638 ntBASIC14.98□□□□□ -0.01
CLCC1Q96S66 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CLCC1Q96S66 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCC1Q96S66 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.98□□□□□ -0.01
CLCC1Q96S66 AC068587.9-201ENST00000641814 219 ntBASIC14.98□□□□□ -0.01
CLCC1Q96S66 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.98□□□□□ -0.01
CLCC1Q96S66 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCC1Q96S66 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLCC1Q96S66 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCC1Q96S66 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.98□□□□□ -0.01
CLCC1Q96S66 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.98□□□□□ -0.01
CLCC1Q96S66 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCC1Q96S66 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCC1Q96S66 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCC1Q96S66 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCC1Q96S66 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCC1Q96S66 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.98□□□□□ -0.01
CLCC1Q96S66 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCC1Q96S66 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.98□□□□□ -0.01
CLCC1Q96S66 AC096733.2-201ENST00000609937 1394 ntBASIC14.98□□□□□ -0.01
CLCC1Q96S66 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLCC1Q96S66 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLCC1Q96S66 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLCC1Q96S66 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
CLCC1Q96S66 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLCC1Q96S66 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLCC1Q96S66 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CLCC1Q96S66 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLCC1Q96S66 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLCC1Q96S66 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.97□□□□□ -0.01
CLCC1Q96S66 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLCC1Q96S66 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLCC1Q96S66 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CLCC1Q96S66 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLCC1Q96S66 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.97□□□□□ -0.01
CLCC1Q96S66 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLCC1Q96S66 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLCC1Q96S66 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLCC1Q96S66 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLCC1Q96S66 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLCC1Q96S66 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLCC1Q96S66 KRT8P32-201ENST00000512863 1461 ntBASIC14.97□□□□□ -0.01
CLCC1Q96S66 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
CLCC1Q96S66 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
CLCC1Q96S66 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLCC1Q96S66 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLCC1Q96S66 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CLCC1Q96S66 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLCC1Q96S66 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.97□□□□□ -0.01
CLCC1Q96S66 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.97□□□□□ -0.01
CLCC1Q96S66 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.97□□□□□ -0.01
CLCC1Q96S66 MIR4497-201ENST00000583208 89 ntBASIC14.97□□□□□ -0.01
CLCC1Q96S66 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.97□□□□□ -0.01
CLCC1Q96S66 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLCC1Q96S66 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.97□□□□□ -0.01
CLCC1Q96S66 AC008622.2-201ENST00000617006 1229 ntBASIC14.97□□□□□ -0.01
CLCC1Q96S66 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLCC1Q96S66 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLCC1Q96S66 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLCC1Q96S66 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLCC1Q96S66 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLCC1Q96S66 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLCC1Q96S66 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CLCC1Q96S66 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.97□□□□□ -0.01
CLCC1Q96S66 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLCC1Q96S66 MTMR9LP-203ENST00000426597 1545 ntBASIC14.97□□□□□ -0.01
CLCC1Q96S66 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLCC1Q96S66 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLCC1Q96S66 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLCC1Q96S66 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms