Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 AC034236.2-201ENST00000606662 1610 ntBASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 AC051619.7-201ENST00000568314 623 ntBASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 AL133338.1-201ENST00000565695 1517 ntBASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNTNAP3BQ96NU0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CNTNAP3BQ96NU0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CNTNAP3BQ96NU0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CNTNAP3BQ96NU0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CNTNAP3BQ96NU0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.89■□□□□ 0.3
CNTNAP3BQ96NU0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNTNAP3BQ96NU0 LINC01126-201ENST00000623515 1646 ntBASIC16.89■□□□□ 0.29
CNTNAP3BQ96NU0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNTNAP3BQ96NU0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.89■□□□□ 0.29
CNTNAP3BQ96NU0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNTNAP3BQ96NU0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNTNAP3BQ96NU0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.89■□□□□ 0.29
CNTNAP3BQ96NU0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
CNTNAP3BQ96NU0 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNTNAP3BQ96NU0 AC092658.1-201ENST00000505836 891 ntBASIC16.89■□□□□ 0.29
CNTNAP3BQ96NU0 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.89■□□□□ 0.29
CNTNAP3BQ96NU0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.89■□□□□ 0.29
CNTNAP3BQ96NU0 TCF3P1-201ENST00000423021 1937 ntBASIC16.89■□□□□ 0.29
CNTNAP3BQ96NU0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CNTNAP3BQ96NU0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CNTNAP3BQ96NU0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CNTNAP3BQ96NU0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNTNAP3BQ96NU0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNTNAP3BQ96NU0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CNTNAP3BQ96NU0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNTNAP3BQ96NU0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 AC004790.2-201ENST00000623588 572 ntBASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 AC009093.7-201ENST00000623853 1223 ntBASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNTNAP3BQ96NU0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms