Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.29■□□□□ 0.52
IFT43Q96FT9 MIR3180-1-201ENST00000580374 94 ntBASIC18.29■□□□□ 0.52
IFT43Q96FT9 MIR3180-3-201ENST00000584616 94 ntBASIC18.29■□□□□ 0.52
IFT43Q96FT9 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
IFT43Q96FT9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.29■□□□□ 0.52
IFT43Q96FT9 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
IFT43Q96FT9 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
IFT43Q96FT9 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
IFT43Q96FT9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
IFT43Q96FT9 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
IFT43Q96FT9 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
IFT43Q96FT9 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
IFT43Q96FT9 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.29■□□□□ 0.52
IFT43Q96FT9 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IFT43Q96FT9 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IFT43Q96FT9 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.28■□□□□ 0.52
IFT43Q96FT9 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
IFT43Q96FT9 AC084018.2-201ENST00000613093 2607 ntBASIC18.28■□□□□ 0.52
IFT43Q96FT9 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IFT43Q96FT9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
IFT43Q96FT9 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IFT43Q96FT9 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IFT43Q96FT9 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
IFT43Q96FT9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.28■□□□□ 0.52
IFT43Q96FT9 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.28■□□□□ 0.52
IFT43Q96FT9 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
IFT43Q96FT9 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.28■□□□□ 0.52
IFT43Q96FT9 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.28■□□□□ 0.52
IFT43Q96FT9 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.28■□□□□ 0.52
IFT43Q96FT9 AL121894.2-201ENST00000602977 491 ntBASIC18.28■□□□□ 0.52
IFT43Q96FT9 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.28■□□□□ 0.52
IFT43Q96FT9 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.28■□□□□ 0.52
IFT43Q96FT9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.28■□□□□ 0.52
IFT43Q96FT9 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
IFT43Q96FT9 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IFT43Q96FT9 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
IFT43Q96FT9 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
IFT43Q96FT9 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
IFT43Q96FT9 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
IFT43Q96FT9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
IFT43Q96FT9 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
IFT43Q96FT9 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
IFT43Q96FT9 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IFT43Q96FT9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
IFT43Q96FT9 SIRPAP1-201ENST00000448467 1770 ntBASIC18.27■□□□□ 0.52
IFT43Q96FT9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.27■□□□□ 0.52
IFT43Q96FT9 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
IFT43Q96FT9 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.27■□□□□ 0.52
IFT43Q96FT9 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
IFT43Q96FT9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IFT43Q96FT9 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
IFT43Q96FT9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.27■□□□□ 0.52
IFT43Q96FT9 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
IFT43Q96FT9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.27■□□□□ 0.52
IFT43Q96FT9 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IFT43Q96FT9 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IFT43Q96FT9 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IFT43Q96FT9 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.27■□□□□ 0.52
IFT43Q96FT9 TSPY22P-201ENST00000427496 604 ntBASIC18.27■□□□□ 0.52
IFT43Q96FT9 AP002383.4-201ENST00000442518 975 ntBASIC18.27■□□□□ 0.52
IFT43Q96FT9 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.27■□□□□ 0.52
IFT43Q96FT9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.27■□□□□ 0.52
IFT43Q96FT9 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.27■□□□□ 0.52
IFT43Q96FT9 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.27■□□□□ 0.52
IFT43Q96FT9 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
IFT43Q96FT9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.27■□□□□ 0.52
IFT43Q96FT9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
IFT43Q96FT9 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
IFT43Q96FT9 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
IFT43Q96FT9 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
IFT43Q96FT9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.27■□□□□ 0.52
IFT43Q96FT9 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.27■□□□□ 0.52
IFT43Q96FT9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
IFT43Q96FT9 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
IFT43Q96FT9 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
IFT43Q96FT9 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
IFT43Q96FT9 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
IFT43Q96FT9 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
IFT43Q96FT9 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
IFT43Q96FT9 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
IFT43Q96FT9 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.27■□□□□ 0.51
IFT43Q96FT9 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
IFT43Q96FT9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.51
IFT43Q96FT9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
IFT43Q96FT9 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IFT43Q96FT9 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IFT43Q96FT9 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.26■□□□□ 0.51
IFT43Q96FT9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IFT43Q96FT9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IFT43Q96FT9 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.26■□□□□ 0.51
IFT43Q96FT9 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.26■□□□□ 0.51
IFT43Q96FT9 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
IFT43Q96FT9 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
IFT43Q96FT9 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.26■□□□□ 0.51
IFT43Q96FT9 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IFT43Q96FT9 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
IFT43Q96FT9 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
IFT43Q96FT9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.26■□□□□ 0.51
IFT43Q96FT9 AC132938.6-201ENST00000623828 1655 ntBASIC18.26■□□□□ 0.51
IFT43Q96FT9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms