Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX11Q96FC9 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.07■□□□□ 0.96
DDX11Q96FC9 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.07■□□□□ 0.96
DDX11Q96FC9 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.07■□□□□ 0.96
DDX11Q96FC9 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
DDX11Q96FC9 Z69720.1-201ENST00000601483 472 ntBASIC21.07■□□□□ 0.96
DDX11Q96FC9 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.07■□□□□ 0.96
DDX11Q96FC9 AC138894.3-201ENST00000603787 634 ntBASIC21.07■□□□□ 0.96
DDX11Q96FC9 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
DDX11Q96FC9 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
DDX11Q96FC9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX11Q96FC9 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX11Q96FC9 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC21.07■□□□□ 0.96
DDX11Q96FC9 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX11Q96FC9 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
DDX11Q96FC9 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX11Q96FC9 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
DDX11Q96FC9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
DDX11Q96FC9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DDX11Q96FC9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
DDX11Q96FC9 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.06■□□□□ 0.96
DDX11Q96FC9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX11Q96FC9 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
DDX11Q96FC9 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.06■□□□□ 0.96
DDX11Q96FC9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX11Q96FC9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX11Q96FC9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX11Q96FC9 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX11Q96FC9 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.06■□□□□ 0.96
DDX11Q96FC9 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DDX11Q96FC9 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DDX11Q96FC9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX11Q96FC9 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.06■□□□□ 0.96
DDX11Q96FC9 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.06■□□□□ 0.96
DDX11Q96FC9 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX11Q96FC9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX11Q96FC9 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.06■□□□□ 0.96
DDX11Q96FC9 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX11Q96FC9 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX11Q96FC9 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX11Q96FC9 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX11Q96FC9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX11Q96FC9 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC21.06■□□□□ 0.96
DDX11Q96FC9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX11Q96FC9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC21.06■□□□□ 0.96
DDX11Q96FC9 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX11Q96FC9 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DDX11Q96FC9 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DDX11Q96FC9 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.05■□□□□ 0.96
DDX11Q96FC9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
DDX11Q96FC9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX11Q96FC9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX11Q96FC9 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DDX11Q96FC9 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
DDX11Q96FC9 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.05■□□□□ 0.96
DDX11Q96FC9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DDX11Q96FC9 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
DDX11Q96FC9 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
DDX11Q96FC9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
DDX11Q96FC9 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX11Q96FC9 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX11Q96FC9 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.05■□□□□ 0.96
DDX11Q96FC9 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DDX11Q96FC9 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX11Q96FC9 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.05■□□□□ 0.96
DDX11Q96FC9 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.05■□□□□ 0.96
DDX11Q96FC9 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DDX11Q96FC9 AC099336.1-202ENST00000602961 463 ntBASIC21.05■□□□□ 0.96
DDX11Q96FC9 AL592071.1-201ENST00000611956 408 ntBASIC21.05■□□□□ 0.96
DDX11Q96FC9 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC21.05■□□□□ 0.96
DDX11Q96FC9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
DDX11Q96FC9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX11Q96FC9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DDX11Q96FC9 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX11Q96FC9 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDX11Q96FC9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
DDX11Q96FC9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
DDX11Q96FC9 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DDX11Q96FC9 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX11Q96FC9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21.04■□□□□ 0.96
DDX11Q96FC9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
DDX11Q96FC9 KRT18P55-202ENST00000578578 1546 ntBASIC21.04■□□□□ 0.96
DDX11Q96FC9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX11Q96FC9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX11Q96FC9 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DDX11Q96FC9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.04■□□□□ 0.96
DDX11Q96FC9 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX11Q96FC9 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.04■□□□□ 0.96
DDX11Q96FC9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.04■□□□□ 0.96
DDX11Q96FC9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX11Q96FC9 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.04■□□□□ 0.96
DDX11Q96FC9 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX11Q96FC9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DDX11Q96FC9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DDX11Q96FC9 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX11Q96FC9 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
DDX11Q96FC9 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.04■□□□□ 0.96
DDX11Q96FC9 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.04■□□□□ 0.96
DDX11Q96FC9 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.04■□□□□ 0.96
DDX11Q96FC9 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms