Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.06■□□□□ 0.48
RTP4Q96DX8 AL121761.2-201ENST00000598007 1648 ntBASIC18.06■□□□□ 0.48
RTP4Q96DX8 AC010460.3-201ENST00000511359 1579 ntBASIC18.06■□□□□ 0.48
RTP4Q96DX8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTP4Q96DX8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
RTP4Q96DX8 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTP4Q96DX8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RTP4Q96DX8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTP4Q96DX8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTP4Q96DX8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RTP4Q96DX8 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RTP4Q96DX8 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
RTP4Q96DX8 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
RTP4Q96DX8 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
RTP4Q96DX8 AL139327.4-201ENST00000612362 153 ntBASIC18.06■□□□□ 0.48
RTP4Q96DX8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.06■□□□□ 0.48
RTP4Q96DX8 AC116407.4-201ENST00000623319 1061 ntBASIC18.06■□□□□ 0.48
RTP4Q96DX8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RTP4Q96DX8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.06■□□□□ 0.48
RTP4Q96DX8 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.06■□□□□ 0.48
RTP4Q96DX8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTP4Q96DX8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RTP4Q96DX8 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RTP4Q96DX8 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RTP4Q96DX8 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTP4Q96DX8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.06■□□□□ 0.48
RTP4Q96DX8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTP4Q96DX8 AC009053.2-201ENST00000563701 2365 ntBASIC18.05■□□□□ 0.48
RTP4Q96DX8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTP4Q96DX8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.05■□□□□ 0.48
RTP4Q96DX8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTP4Q96DX8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTP4Q96DX8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RTP4Q96DX8 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTP4Q96DX8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.05■□□□□ 0.48
RTP4Q96DX8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.05■□□□□ 0.48
RTP4Q96DX8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTP4Q96DX8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.05■□□□□ 0.48
RTP4Q96DX8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTP4Q96DX8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTP4Q96DX8 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTP4Q96DX8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTP4Q96DX8 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTP4Q96DX8 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTP4Q96DX8 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RTP4Q96DX8 RN7SL606P-201ENST00000472779 293 ntBASIC18.05■□□□□ 0.48
RTP4Q96DX8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.05■□□□□ 0.48
RTP4Q96DX8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.05■□□□□ 0.48
RTP4Q96DX8 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTP4Q96DX8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTP4Q96DX8 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.05■□□□□ 0.48
RTP4Q96DX8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTP4Q96DX8 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTP4Q96DX8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RTP4Q96DX8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTP4Q96DX8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTP4Q96DX8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTP4Q96DX8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTP4Q96DX8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.05■□□□□ 0.48
RTP4Q96DX8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.05■□□□□ 0.48
RTP4Q96DX8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.05■□□□□ 0.48
RTP4Q96DX8 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTP4Q96DX8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTP4Q96DX8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTP4Q96DX8 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.04■□□□□ 0.48
RTP4Q96DX8 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTP4Q96DX8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTP4Q96DX8 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.04■□□□□ 0.48
RTP4Q96DX8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.04■□□□□ 0.48
RTP4Q96DX8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RTP4Q96DX8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTP4Q96DX8 AC116353.5-201ENST00000638148 1699 ntBASIC18.04■□□□□ 0.48
RTP4Q96DX8 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTP4Q96DX8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTP4Q96DX8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.04■□□□□ 0.48
RTP4Q96DX8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RTP4Q96DX8 AL136038.3-201ENST00000561909 1096 ntBASIC18.04■□□□□ 0.48
RTP4Q96DX8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.04■□□□□ 0.48
RTP4Q96DX8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.04■□□□□ 0.48
RTP4Q96DX8 AC093458.2-201ENST00000623150 629 ntBASIC18.04■□□□□ 0.48
RTP4Q96DX8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.04■□□□□ 0.48
RTP4Q96DX8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTP4Q96DX8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RTP4Q96DX8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTP4Q96DX8 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.04■□□□□ 0.48
RTP4Q96DX8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTP4Q96DX8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.04■□□□□ 0.48
RTP4Q96DX8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTP4Q96DX8 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.04■□□□□ 0.48
RTP4Q96DX8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTP4Q96DX8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTP4Q96DX8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTP4Q96DX8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTP4Q96DX8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTP4Q96DX8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.03■□□□□ 0.48
RTP4Q96DX8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTP4Q96DX8 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTP4Q96DX8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.03■□□□□ 0.48
RTP4Q96DX8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTP4Q96DX8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms