Protein–RNA interactions for Protein: Q96D46

NMD3, 60S ribosomal export protein NMD3, humanhuman

Known RBP Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3Q96D46 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NMD3Q96D46 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NMD3Q96D46 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NMD3Q96D46 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.85■□□□□ 0.29
NMD3Q96D46 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NMD3Q96D46 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NMD3Q96D46 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.85■□□□□ 0.29
NMD3Q96D46 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.85■□□□□ 0.29
NMD3Q96D46 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NMD3Q96D46 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
NMD3Q96D46 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.85■□□□□ 0.29
NMD3Q96D46 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
NMD3Q96D46 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.85■□□□□ 0.29
NMD3Q96D46 CR392000.1-201ENST00000624770 1228 ntBASIC16.85■□□□□ 0.29
NMD3Q96D46 AL031985.4-201ENST00000642138 673 ntBASIC16.85■□□□□ 0.29
NMD3Q96D46 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NMD3Q96D46 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NMD3Q96D46 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NMD3Q96D46 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.85■□□□□ 0.29
NMD3Q96D46 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NMD3Q96D46 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NMD3Q96D46 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NMD3Q96D46 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NMD3Q96D46 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
NMD3Q96D46 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NMD3Q96D46 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NMD3Q96D46 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NMD3Q96D46 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.85■□□□□ 0.29
NMD3Q96D46 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
NMD3Q96D46 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
NMD3Q96D46 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NMD3Q96D46 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.85■□□□□ 0.29
NMD3Q96D46 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NMD3Q96D46 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
NMD3Q96D46 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NMD3Q96D46 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NMD3Q96D46 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NMD3Q96D46 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.84■□□□□ 0.29
NMD3Q96D46 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NMD3Q96D46 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NMD3Q96D46 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NMD3Q96D46 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NMD3Q96D46 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NMD3Q96D46 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NMD3Q96D46 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NMD3Q96D46 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NMD3Q96D46 MESTP1-201ENST00000404287 994 ntBASIC16.84■□□□□ 0.29
NMD3Q96D46 AC004951.3-201ENST00000418645 1148 ntBASIC16.84■□□□□ 0.29
NMD3Q96D46 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NMD3Q96D46 AC011506.1-201ENST00000474329 610 ntBASIC16.84■□□□□ 0.29
NMD3Q96D46 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.84■□□□□ 0.29
NMD3Q96D46 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NMD3Q96D46 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.84■□□□□ 0.29
NMD3Q96D46 AC130371.2-201ENST00000619443 611 ntBASIC16.84■□□□□ 0.29
NMD3Q96D46 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.84■□□□□ 0.29
NMD3Q96D46 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.84■□□□□ 0.29
NMD3Q96D46 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
NMD3Q96D46 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NMD3Q96D46 AL135905.2-201ENST00000584934 1404 ntBASIC16.84■□□□□ 0.29
NMD3Q96D46 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NMD3Q96D46 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NMD3Q96D46 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.84■□□□□ 0.29
NMD3Q96D46 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NMD3Q96D46 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
NMD3Q96D46 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NMD3Q96D46 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NMD3Q96D46 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NMD3Q96D46 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NMD3Q96D46 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
NMD3Q96D46 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
NMD3Q96D46 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NMD3Q96D46 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NMD3Q96D46 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NMD3Q96D46 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
NMD3Q96D46 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NMD3Q96D46 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NMD3Q96D46 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NMD3Q96D46 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NMD3Q96D46 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.83■□□□□ 0.28
NMD3Q96D46 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NMD3Q96D46 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.83■□□□□ 0.28
NMD3Q96D46 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NMD3Q96D46 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.83■□□□□ 0.28
NMD3Q96D46 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NMD3Q96D46 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.83■□□□□ 0.28
NMD3Q96D46 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.83■□□□□ 0.28
NMD3Q96D46 UBE2SP1-201ENST00000450587 669 ntBASIC16.83■□□□□ 0.28
NMD3Q96D46 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.83■□□□□ 0.28
NMD3Q96D46 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.83■□□□□ 0.28
NMD3Q96D46 PRSS44-201ENST00000515154 1146 ntBASIC16.83■□□□□ 0.28
NMD3Q96D46 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.83■□□□□ 0.28
NMD3Q96D46 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.83■□□□□ 0.28
NMD3Q96D46 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.83■□□□□ 0.28
NMD3Q96D46 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.83■□□□□ 0.28
NMD3Q96D46 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.83■□□□□ 0.28
NMD3Q96D46 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.83■□□□□ 0.28
NMD3Q96D46 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.83■□□□□ 0.28
NMD3Q96D46 AC005052.1-201ENST00000625181 2492 ntBASIC16.82■□□□□ 0.28
NMD3Q96D46 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NMD3Q96D46 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms