Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP13Q92995 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.56■□□□□ 0.56
USP13Q92995 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP13Q92995 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
USP13Q92995 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.55■□□□□ 0.56
USP13Q92995 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
USP13Q92995 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP13Q92995 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP13Q92995 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP13Q92995 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP13Q92995 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
USP13Q92995 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP13Q92995 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP13Q92995 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP13Q92995 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP13Q92995 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
USP13Q92995 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.55■□□□□ 0.56
USP13Q92995 PMS2P1-201ENST00000431037 1228 ntBASIC18.55■□□□□ 0.56
USP13Q92995 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP13Q92995 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP13Q92995 AC139887.3-201ENST00000568585 713 ntBASIC18.55■□□□□ 0.56
USP13Q92995 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.55■□□□□ 0.56
USP13Q92995 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
USP13Q92995 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.55■□□□□ 0.56
USP13Q92995 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.55■□□□□ 0.56
USP13Q92995 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.55■□□□□ 0.56
USP13Q92995 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP13Q92995 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
USP13Q92995 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
USP13Q92995 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.55■□□□□ 0.56
USP13Q92995 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP13Q92995 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP13Q92995 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP13Q92995 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.55■□□□□ 0.56
USP13Q92995 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP13Q92995 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.55■□□□□ 0.56
USP13Q92995 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP13Q92995 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP13Q92995 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP13Q92995 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP13Q92995 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP13Q92995 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.54■□□□□ 0.56
USP13Q92995 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
USP13Q92995 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP13Q92995 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.54■□□□□ 0.56
USP13Q92995 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP13Q92995 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP13Q92995 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP13Q92995 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.54■□□□□ 0.56
USP13Q92995 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP13Q92995 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP13Q92995 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.54■□□□□ 0.56
USP13Q92995 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.54■□□□□ 0.56
USP13Q92995 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.54■□□□□ 0.56
USP13Q92995 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.54■□□□□ 0.56
USP13Q92995 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.54■□□□□ 0.56
USP13Q92995 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.54■□□□□ 0.56
USP13Q92995 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.54■□□□□ 0.56
USP13Q92995 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.54■□□□□ 0.56
USP13Q92995 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.54■□□□□ 0.56
USP13Q92995 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.54■□□□□ 0.56
USP13Q92995 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.54■□□□□ 0.56
USP13Q92995 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
USP13Q92995 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
USP13Q92995 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.54■□□□□ 0.56
USP13Q92995 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP13Q92995 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.54■□□□□ 0.56
USP13Q92995 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP13Q92995 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.54■□□□□ 0.56
USP13Q92995 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
USP13Q92995 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP13Q92995 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP13Q92995 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP13Q92995 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP13Q92995 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP13Q92995 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP13Q92995 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.53■□□□□ 0.56
USP13Q92995 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP13Q92995 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP13Q92995 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP13Q92995 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.53■□□□□ 0.56
USP13Q92995 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.53■□□□□ 0.56
USP13Q92995 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP13Q92995 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
USP13Q92995 PHGDH-209ENST00000641074 1780 ntBASIC18.53■□□□□ 0.56
USP13Q92995 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP13Q92995 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP13Q92995 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP13Q92995 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP13Q92995 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP13Q92995 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP13Q92995 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.53■□□□□ 0.56
USP13Q92995 AC007967.3-201ENST00000434308 558 ntBASIC18.53■□□□□ 0.56
USP13Q92995 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.53■□□□□ 0.56
USP13Q92995 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP13Q92995 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.53■□□□□ 0.56
USP13Q92995 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.53■□□□□ 0.56
USP13Q92995 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP13Q92995 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.53■□□□□ 0.56
USP13Q92995 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms