Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
AP3S1Q92572 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S1Q92572 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S1Q92572 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S1Q92572 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
AP3S1Q92572 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S1Q92572 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S1Q92572 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S1Q92572 AC100803.2-201ENST00000562459 1963 ntBASIC15.64■□□□□ 0.09
AP3S1Q92572 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S1Q92572 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.64■□□□□ 0.09
AP3S1Q92572 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S1Q92572 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S1Q92572 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.64■□□□□ 0.09
AP3S1Q92572 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.64■□□□□ 0.09
AP3S1Q92572 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S1Q92572 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC15.64■□□□□ 0.09
AP3S1Q92572 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
AP3S1Q92572 KRT18P5-201ENST00000436075 1291 ntBASIC15.64■□□□□ 0.09
AP3S1Q92572 MST1L-201ENST00000442552 2185 ntBASIC15.64■□□□□ 0.09
AP3S1Q92572 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.64■□□□□ 0.09
AP3S1Q92572 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S1Q92572 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.64■□□□□ 0.09
AP3S1Q92572 BET1L-207ENST00000529614 560 ntTSL 5 BASIC15.64■□□□□ 0.09
AP3S1Q92572 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S1Q92572 CKBP1-201ENST00000565489 1086 ntBASIC15.64■□□□□ 0.09
AP3S1Q92572 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
AP3S1Q92572 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S1Q92572 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.64■□□□□ 0.09
AP3S1Q92572 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S1Q92572 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.64■□□□□ 0.09
AP3S1Q92572 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S1Q92572 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S1Q92572 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S1Q92572 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S1Q92572 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
AP3S1Q92572 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP3S1Q92572 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.64■□□□□ 0.09
AP3S1Q92572 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.63■□□□□ 0.09
AP3S1Q92572 AC008741.2-201ENST00000612792 3115 ntBASIC15.63■□□□□ 0.09
AP3S1Q92572 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
AP3S1Q92572 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
AP3S1Q92572 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.63■□□□□ 0.09
AP3S1Q92572 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.63■□□□□ 0.09
AP3S1Q92572 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
AP3S1Q92572 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.63■□□□□ 0.09
AP3S1Q92572 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
AP3S1Q92572 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.63■□□□□ 0.09
AP3S1Q92572 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
AP3S1Q92572 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S1Q92572 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.63■□□□□ 0.09
AP3S1Q92572 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
AP3S1Q92572 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
AP3S1Q92572 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S1Q92572 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
AP3S1Q92572 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
AP3S1Q92572 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S1Q92572 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S1Q92572 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S1Q92572 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S1Q92572 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S1Q92572 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.63■□□□□ 0.09
AP3S1Q92572 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC15.63■□□□□ 0.09
AP3S1Q92572 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
AP3S1Q92572 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.63■□□□□ 0.09
AP3S1Q92572 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.63■□□□□ 0.09
AP3S1Q92572 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S1Q92572 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.63■□□□□ 0.09
AP3S1Q92572 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.63■□□□□ 0.09
AP3S1Q92572 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.63■□□□□ 0.09
AP3S1Q92572 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S1Q92572 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
AP3S1Q92572 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S1Q92572 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
AP3S1Q92572 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.63■□□□□ 0.09
AP3S1Q92572 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.63■□□□□ 0.09
AP3S1Q92572 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
AP3S1Q92572 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.63■□□□□ 0.09
AP3S1Q92572 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S1Q92572 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S1Q92572 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.63■□□□□ 0.09
AP3S1Q92572 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
AP3S1Q92572 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S1Q92572 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S1Q92572 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S1Q92572 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP3S1Q92572 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
AP3S1Q92572 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S1Q92572 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.62■□□□□ 0.09
AP3S1Q92572 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S1Q92572 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S1Q92572 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S1Q92572 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
AP3S1Q92572 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
AP3S1Q92572 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
AP3S1Q92572 PCDHB17P-201ENST00000539533 2393 ntBASIC15.62■□□□□ 0.09
AP3S1Q92572 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.62■□□□□ 0.09
AP3S1Q92572 AL513477.1-201ENST00000602865 2407 ntBASIC15.62■□□□□ 0.09
AP3S1Q92572 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP3S1Q92572 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms