Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 LINC01311-201ENST00000565162 1445 ntBASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 MIR662-201ENST00000384847 95 ntBASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 AC009949.1-201ENST00000623048 1830 ntBASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAF3IP1Q8TDR0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAF3IP1Q8TDR0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAF3IP1Q8TDR0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAF3IP1Q8TDR0 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAF3IP1Q8TDR0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAF3IP1Q8TDR0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAF3IP1Q8TDR0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAF3IP1Q8TDR0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAF3IP1Q8TDR0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAF3IP1Q8TDR0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAF3IP1Q8TDR0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TRAF3IP1Q8TDR0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAF3IP1Q8TDR0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAF3IP1Q8TDR0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAF3IP1Q8TDR0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.5■□□□□ 0.55
TRAF3IP1Q8TDR0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAF3IP1Q8TDR0 LINC01238-205ENST00000567549 1107 ntBASIC18.5■□□□□ 0.55
TRAF3IP1Q8TDR0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.5■□□□□ 0.55
TRAF3IP1Q8TDR0 GPR32P1-201ENST00000601788 811 ntBASIC18.5■□□□□ 0.55
TRAF3IP1Q8TDR0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAF3IP1Q8TDR0 AL353692.3-201ENST00000407031 1396 ntBASIC18.5■□□□□ 0.55
TRAF3IP1Q8TDR0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAF3IP1Q8TDR0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
TRAF3IP1Q8TDR0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAF3IP1Q8TDR0 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TRAF3IP1Q8TDR0 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRAF3IP1Q8TDR0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 VENTXP5-201ENST00000523979 775 ntBASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAF3IP1Q8TDR0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAF3IP1Q8TDR0 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms