Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
CHD5Q8TDI0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CHD5Q8TDI0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHD5Q8TDI0 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.85■□□□□ 0.45
CHD5Q8TDI0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHD5Q8TDI0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.85■□□□□ 0.45
CHD5Q8TDI0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.85■□□□□ 0.45
CHD5Q8TDI0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHD5Q8TDI0 HNRNPDP1-201ENST00000439535 754 ntBASIC17.85■□□□□ 0.45
CHD5Q8TDI0 AC009078.2-202ENST00000463353 338 ntBASIC17.85■□□□□ 0.45
CHD5Q8TDI0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
CHD5Q8TDI0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.85■□□□□ 0.45
CHD5Q8TDI0 NKAPP1-205ENST00000585790 367 ntBASIC17.85■□□□□ 0.45
CHD5Q8TDI0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.85■□□□□ 0.45
CHD5Q8TDI0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CHD5Q8TDI0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHD5Q8TDI0 GNAS-203ENST00000306120 1878 ntBASIC17.85■□□□□ 0.45
CHD5Q8TDI0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHD5Q8TDI0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHD5Q8TDI0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CHD5Q8TDI0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHD5Q8TDI0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CHD5Q8TDI0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CHD5Q8TDI0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHD5Q8TDI0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.85■□□□□ 0.45
CHD5Q8TDI0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 AC132008.2-207ENST00000454517 770 ntBASIC17.84■□□□□ 0.45
CHD5Q8TDI0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 AC145285.3-201ENST00000564603 959 ntBASIC17.84■□□□□ 0.45
CHD5Q8TDI0 STK25P1-201ENST00000585406 838 ntBASIC17.84■□□□□ 0.45
CHD5Q8TDI0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CHD5Q8TDI0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CHD5Q8TDI0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.83■□□□□ 0.45
CHD5Q8TDI0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHD5Q8TDI0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHD5Q8TDI0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.83■□□□□ 0.45
CHD5Q8TDI0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHD5Q8TDI0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.83■□□□□ 0.45
CHD5Q8TDI0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHD5Q8TDI0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.45
CHD5Q8TDI0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHD5Q8TDI0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHD5Q8TDI0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHD5Q8TDI0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.83■□□□□ 0.44
CHD5Q8TDI0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.83■□□□□ 0.44
CHD5Q8TDI0 FAM197Y8-203ENST00000450145 560 ntBASIC17.83■□□□□ 0.44
CHD5Q8TDI0 IGHV3-52-201ENST00000519770 353 ntBASIC17.83■□□□□ 0.44
CHD5Q8TDI0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.83■□□□□ 0.44
CHD5Q8TDI0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.83■□□□□ 0.44
CHD5Q8TDI0 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.83■□□□□ 0.44
CHD5Q8TDI0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.83■□□□□ 0.44
CHD5Q8TDI0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHD5Q8TDI0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.83■□□□□ 0.44
CHD5Q8TDI0 AC008735.5-201ENST00000623544 497 ntBASIC17.83■□□□□ 0.44
CHD5Q8TDI0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.83■□□□□ 0.44
CHD5Q8TDI0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHD5Q8TDI0 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHD5Q8TDI0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHD5Q8TDI0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CHD5Q8TDI0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.83■□□□□ 0.44
CHD5Q8TDI0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHD5Q8TDI0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHD5Q8TDI0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.44
CHD5Q8TDI0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CHD5Q8TDI0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 AC003669.1-201ENST00000334569 611 ntBASIC17.82■□□□□ 0.44
CHD5Q8TDI0 PRYP5-201ENST00000451909 266 ntBASIC17.82■□□□□ 0.44
CHD5Q8TDI0 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 AC012640.2-201ENST00000561606 901 ntBASIC17.82■□□□□ 0.44
CHD5Q8TDI0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHD5Q8TDI0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms