Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCHCR1Q8TD31 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
CCHCR1Q8TD31 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.49■□□□□ 0.55
CCHCR1Q8TD31 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCHCR1Q8TD31 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
CCHCR1Q8TD31 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCHCR1Q8TD31 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCHCR1Q8TD31 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.49■□□□□ 0.55
CCHCR1Q8TD31 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.49■□□□□ 0.55
CCHCR1Q8TD31 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CCHCR1Q8TD31 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.49■□□□□ 0.55
CCHCR1Q8TD31 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCHCR1Q8TD31 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.49■□□□□ 0.55
CCHCR1Q8TD31 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCHCR1Q8TD31 AC063952.2-201ENST00000498792 1227 ntBASIC18.49■□□□□ 0.55
CCHCR1Q8TD31 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.49■□□□□ 0.55
CCHCR1Q8TD31 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.49■□□□□ 0.55
CCHCR1Q8TD31 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCHCR1Q8TD31 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.49■□□□□ 0.55
CCHCR1Q8TD31 MIR3917-201ENST00000580971 93 ntBASIC18.49■□□□□ 0.55
CCHCR1Q8TD31 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CCHCR1Q8TD31 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCHCR1Q8TD31 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
CCHCR1Q8TD31 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCHCR1Q8TD31 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCHCR1Q8TD31 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.49■□□□□ 0.55
CCHCR1Q8TD31 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
CCHCR1Q8TD31 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCHCR1Q8TD31 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CCHCR1Q8TD31 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCHCR1Q8TD31 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCHCR1Q8TD31 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCHCR1Q8TD31 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CCHCR1Q8TD31 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCHCR1Q8TD31 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CCHCR1Q8TD31 STARP1-201ENST00000397973 869 ntBASIC18.48■□□□□ 0.55
CCHCR1Q8TD31 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCHCR1Q8TD31 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms