Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHD6Q8TD26 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHD6Q8TD26 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
CHD6Q8TD26 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.77■□□□□ 0.11
CHD6Q8TD26 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHD6Q8TD26 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.77■□□□□ 0.11
CHD6Q8TD26 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.77■□□□□ 0.11
CHD6Q8TD26 SDHAP2-201ENST00000455183 2001 ntBASIC15.77■□□□□ 0.11
CHD6Q8TD26 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
CHD6Q8TD26 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHD6Q8TD26 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CHD6Q8TD26 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD6Q8TD26 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD6Q8TD26 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD6Q8TD26 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHD6Q8TD26 AC087499.6-201ENST00000411576 835 ntBASIC15.76■□□□□ 0.11
CHD6Q8TD26 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC15.76■□□□□ 0.11
CHD6Q8TD26 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.76■□□□□ 0.11
CHD6Q8TD26 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.76■□□□□ 0.11
CHD6Q8TD26 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.76■□□□□ 0.11
CHD6Q8TD26 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CHD6Q8TD26 SIRPAP1-201ENST00000448467 1770 ntBASIC15.76■□□□□ 0.11
CHD6Q8TD26 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.76■□□□□ 0.11
CHD6Q8TD26 BTBD7P1-201ENST00000447253 1453 ntBASIC15.76■□□□□ 0.11
CHD6Q8TD26 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD6Q8TD26 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD6Q8TD26 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.76■□□□□ 0.11
CHD6Q8TD26 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC15.76■□□□□ 0.11
CHD6Q8TD26 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD6Q8TD26 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD6Q8TD26 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD6Q8TD26 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CHD6Q8TD26 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD6Q8TD26 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD6Q8TD26 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
CHD6Q8TD26 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.76■□□□□ 0.11
CHD6Q8TD26 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD6Q8TD26 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHD6Q8TD26 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.76■□□□□ 0.11
CHD6Q8TD26 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD6Q8TD26 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.76■□□□□ 0.11
CHD6Q8TD26 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.76■□□□□ 0.11
CHD6Q8TD26 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.76■□□□□ 0.11
CHD6Q8TD26 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHD6Q8TD26 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD6Q8TD26 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHD6Q8TD26 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
CHD6Q8TD26 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD6Q8TD26 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHD6Q8TD26 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHD6Q8TD26 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.75■□□□□ 0.11
CHD6Q8TD26 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CHD6Q8TD26 AC234644.1-201ENST00000406065 370 ntBASIC15.75■□□□□ 0.11
CHD6Q8TD26 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.75■□□□□ 0.11
CHD6Q8TD26 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.75■□□□□ 0.11
CHD6Q8TD26 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.75■□□□□ 0.11
CHD6Q8TD26 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
CHD6Q8TD26 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.75■□□□□ 0.11
CHD6Q8TD26 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.75■□□□□ 0.11
CHD6Q8TD26 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.75■□□□□ 0.11
CHD6Q8TD26 MTMR9LP-203ENST00000426597 1545 ntBASIC15.75■□□□□ 0.11
CHD6Q8TD26 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHD6Q8TD26 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
CHD6Q8TD26 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.75■□□□□ 0.11
CHD6Q8TD26 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHD6Q8TD26 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHD6Q8TD26 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHD6Q8TD26 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHD6Q8TD26 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CHD6Q8TD26 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHD6Q8TD26 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.75■□□□□ 0.11
CHD6Q8TD26 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHD6Q8TD26 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHD6Q8TD26 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.75■□□□□ 0.11
CHD6Q8TD26 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CHD6Q8TD26 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.75■□□□□ 0.11
CHD6Q8TD26 SLC7A15P-201ENST00000424028 1363 ntBASIC15.75■□□□□ 0.11
CHD6Q8TD26 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.75■□□□□ 0.11
CHD6Q8TD26 KRT8P13-201ENST00000463294 1010 ntBASIC15.75■□□□□ 0.11
CHD6Q8TD26 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.75■□□□□ 0.11
CHD6Q8TD26 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC15.75■□□□□ 0.11
CHD6Q8TD26 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC15.75■□□□□ 0.11
CHD6Q8TD26 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CHD6Q8TD26 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHD6Q8TD26 AC008738.7-201ENST00000609744 511 ntBASIC15.75■□□□□ 0.11
CHD6Q8TD26 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHD6Q8TD26 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHD6Q8TD26 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC15.75■□□□□ 0.11
CHD6Q8TD26 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHD6Q8TD26 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHD6Q8TD26 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.74■□□□□ 0.11
CHD6Q8TD26 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHD6Q8TD26 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHD6Q8TD26 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.74■□□□□ 0.11
CHD6Q8TD26 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHD6Q8TD26 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CHD6Q8TD26 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.74■□□□□ 0.11
CHD6Q8TD26 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHD6Q8TD26 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.74■□□□□ 0.11
CHD6Q8TD26 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms