Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.96■□□□□ 0.63
LMO3Q8TAP4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LMO3Q8TAP4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LMO3Q8TAP4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
LMO3Q8TAP4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
LMO3Q8TAP4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LMO3Q8TAP4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LMO3Q8TAP4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
LMO3Q8TAP4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.96■□□□□ 0.63
LMO3Q8TAP4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.96■□□□□ 0.63
LMO3Q8TAP4 AC009533.2-201ENST00000543664 586 ntBASIC18.96■□□□□ 0.63
LMO3Q8TAP4 BNIP3P18-201ENST00000593976 575 ntBASIC18.96■□□□□ 0.63
LMO3Q8TAP4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LMO3Q8TAP4 AC091076.1-201ENST00000610741 619 ntBASIC18.96■□□□□ 0.63
LMO3Q8TAP4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.96■□□□□ 0.63
LMO3Q8TAP4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LMO3Q8TAP4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LMO3Q8TAP4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
LMO3Q8TAP4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
LMO3Q8TAP4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
LMO3Q8TAP4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LMO3Q8TAP4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LMO3Q8TAP4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.96■□□□□ 0.63
LMO3Q8TAP4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LMO3Q8TAP4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
LMO3Q8TAP4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LMO3Q8TAP4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LMO3Q8TAP4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.96■□□□□ 0.63
LMO3Q8TAP4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
LMO3Q8TAP4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
LMO3Q8TAP4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
LMO3Q8TAP4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LMO3Q8TAP4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LMO3Q8TAP4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LMO3Q8TAP4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
LMO3Q8TAP4 FAM220CP-201ENST00000395253 831 ntBASIC18.95■□□□□ 0.62
LMO3Q8TAP4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LMO3Q8TAP4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.95■□□□□ 0.62
LMO3Q8TAP4 KRT17P6-201ENST00000453795 1220 ntBASIC18.95■□□□□ 0.62
LMO3Q8TAP4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.95■□□□□ 0.62
LMO3Q8TAP4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.95■□□□□ 0.62
LMO3Q8TAP4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.95■□□□□ 0.62
LMO3Q8TAP4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.95■□□□□ 0.62
LMO3Q8TAP4 AC109462.3-201ENST00000573934 613 ntBASIC18.95■□□□□ 0.62
LMO3Q8TAP4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
LMO3Q8TAP4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
LMO3Q8TAP4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LMO3Q8TAP4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
LMO3Q8TAP4 AC020916.1-201ENST00000587762 1774 ntBASIC18.95■□□□□ 0.62
LMO3Q8TAP4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LMO3Q8TAP4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LMO3Q8TAP4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
LMO3Q8TAP4 FZD10-202ENST00000539839 3282 ntBASIC18.95■□□□□ 0.62
LMO3Q8TAP4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
LMO3Q8TAP4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LMO3Q8TAP4 AP001094.4-201ENST00000579008 2176 ntBASIC18.95■□□□□ 0.62
LMO3Q8TAP4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LMO3Q8TAP4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LMO3Q8TAP4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LMO3Q8TAP4 AC080080.1-201ENST00000625121 2420 ntBASIC18.94■□□□□ 0.62
LMO3Q8TAP4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LMO3Q8TAP4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LMO3Q8TAP4 KRT8P10-201ENST00000450021 1447 ntBASIC18.94■□□□□ 0.62
LMO3Q8TAP4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LMO3Q8TAP4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LMO3Q8TAP4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LMO3Q8TAP4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.94■□□□□ 0.62
LMO3Q8TAP4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.94■□□□□ 0.62
LMO3Q8TAP4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.94■□□□□ 0.62
LMO3Q8TAP4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LMO3Q8TAP4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
LMO3Q8TAP4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.94■□□□□ 0.62
LMO3Q8TAP4 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.94■□□□□ 0.62
LMO3Q8TAP4 AC069148.1-201ENST00000608741 768 ntBASIC18.94■□□□□ 0.62
LMO3Q8TAP4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.94■□□□□ 0.62
LMO3Q8TAP4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
LMO3Q8TAP4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.94■□□□□ 0.62
LMO3Q8TAP4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LMO3Q8TAP4 TP73-AS1-210ENST00000637775 1455 ntBASIC18.94■□□□□ 0.62
LMO3Q8TAP4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
LMO3Q8TAP4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LMO3Q8TAP4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LMO3Q8TAP4 NSUN5P1-202ENST00000421140 1535 ntBASIC18.94■□□□□ 0.62
LMO3Q8TAP4 NSUN5P2-203ENST00000457352 1529 ntBASIC18.94■□□□□ 0.62
LMO3Q8TAP4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LMO3Q8TAP4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LMO3Q8TAP4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LMO3Q8TAP4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LMO3Q8TAP4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LMO3Q8TAP4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.93■□□□□ 0.62
LMO3Q8TAP4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LMO3Q8TAP4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LMO3Q8TAP4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LMO3Q8TAP4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LMO3Q8TAP4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
LMO3Q8TAP4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.93■□□□□ 0.62
LMO3Q8TAP4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.93■□□□□ 0.62
LMO3Q8TAP4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LMO3Q8TAP4 AL353593.2-201ENST00000602529 1483 ntBASIC18.93■□□□□ 0.62
LMO3Q8TAP4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms