Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 KRT18P23-201ENST00000435622 1283 ntBASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 UBE2SP1-201ENST00000450587 669 ntBASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 RARRES2P10-201ENST00000564312 460 ntBASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 AF186192.3-201ENST00000583427 947 ntBASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 AL162727.3-201ENST00000635661 2787 ntBASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RFWD2Q8NHY2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RFWD2Q8NHY2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD2Q8NHY2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.53■□□□□ 0.4
RFWD2Q8NHY2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.53■□□□□ 0.4
RFWD2Q8NHY2 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD2Q8NHY2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.53■□□□□ 0.4
RFWD2Q8NHY2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD2Q8NHY2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD2Q8NHY2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD2Q8NHY2 AC008741.2-201ENST00000612792 3115 ntBASIC17.53■□□□□ 0.4
RFWD2Q8NHY2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RFWD2Q8NHY2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.53■□□□□ 0.4
RFWD2Q8NHY2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD2Q8NHY2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RFWD2Q8NHY2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RFWD2Q8NHY2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD2Q8NHY2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.53■□□□□ 0.4
RFWD2Q8NHY2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.53■□□□□ 0.4
RFWD2Q8NHY2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.53■□□□□ 0.4
RFWD2Q8NHY2 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.53■□□□□ 0.4
RFWD2Q8NHY2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.53■□□□□ 0.4
RFWD2Q8NHY2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD2Q8NHY2 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD2Q8NHY2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD2Q8NHY2 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.53■□□□□ 0.4
RFWD2Q8NHY2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RFWD2Q8NHY2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RFWD2Q8NHY2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RFWD2Q8NHY2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms