Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 FAM185BP-201ENST00000443595 716 ntBASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 GPR53P-205ENST00000457298 1084 ntBASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 MIR6805-201ENST00000615055 62 ntBASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 AC125807.1-201ENST00000483097 614 ntBASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC168Q8NDH2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC168Q8NDH2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC168Q8NDH2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC168Q8NDH2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 TUBB3P1-201ENST00000405796 1332 ntBASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 RPS2P32-201ENST00000439199 892 ntBASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 SPDYE11-202ENST00000450699 704 ntBASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 SPDYE9P-201ENST00000570642 692 ntBASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC168Q8NDH2 SPDYE10P-202ENST00000612005 668 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms