Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC89Q8N998 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC89Q8N998 LINC01451-201ENST00000623792 534 ntBASIC18.42■□□□□ 0.54
CCDC89Q8N998 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC89Q8N998 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CCDC89Q8N998 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC89Q8N998 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC89Q8N998 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC89Q8N998 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CCDC89Q8N998 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CCDC89Q8N998 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC89Q8N998 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC89Q8N998 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC89Q8N998 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC89Q8N998 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
CCDC89Q8N998 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC89Q8N998 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC89Q8N998 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC89Q8N998 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC89Q8N998 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCDC89Q8N998 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
CCDC89Q8N998 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC89Q8N998 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC89Q8N998 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC89Q8N998 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC89Q8N998 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC89Q8N998 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC89Q8N998 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC89Q8N998 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC89Q8N998 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC89Q8N998 AC113404.2-201ENST00000507884 177 ntBASIC18.41■□□□□ 0.54
CCDC89Q8N998 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC89Q8N998 GCSHP2-201ENST00000560971 527 ntBASIC18.41■□□□□ 0.54
CCDC89Q8N998 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC89Q8N998 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC89Q8N998 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC89Q8N998 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CCDC89Q8N998 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC89Q8N998 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC89Q8N998 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC89Q8N998 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC89Q8N998 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC89Q8N998 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC89Q8N998 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC89Q8N998 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC89Q8N998 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC89Q8N998 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CCDC89Q8N998 AL121761.2-201ENST00000598007 1648 ntBASIC18.41■□□□□ 0.54
CCDC89Q8N998 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC89Q8N998 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC89Q8N998 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC89Q8N998 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC89Q8N998 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC89Q8N998 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC89Q8N998 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC89Q8N998 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC89Q8N998 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CCDC89Q8N998 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC89Q8N998 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC89Q8N998 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CCDC89Q8N998 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC89Q8N998 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC89Q8N998 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC89Q8N998 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC89Q8N998 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC89Q8N998 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC89Q8N998 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC89Q8N998 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC89Q8N998 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC89Q8N998 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCDC89Q8N998 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC89Q8N998 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCDC89Q8N998 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC89Q8N998 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC89Q8N998 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC89Q8N998 AC099398.1-201ENST00000567919 2776 ntBASIC18.4■□□□□ 0.54
CCDC89Q8N998 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC89Q8N998 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC89Q8N998 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC89Q8N998 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC89Q8N998 AC022211.2-201ENST00000585075 2527 ntBASIC18.4■□□□□ 0.54
CCDC89Q8N998 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC89Q8N998 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC89Q8N998 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.39■□□□□ 0.54
CCDC89Q8N998 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
CCDC89Q8N998 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC89Q8N998 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC89Q8N998 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC89Q8N998 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC89Q8N998 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC89Q8N998 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC89Q8N998 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC89Q8N998 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC89Q8N998 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC89Q8N998 AC024563.2-201ENST00000603282 481 ntBASIC18.39■□□□□ 0.53
CCDC89Q8N998 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCDC89Q8N998 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCDC89Q8N998 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC89Q8N998 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCDC89Q8N998 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms