Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.89■■□□□ 1.09
CHD1LQ86WJ1 RN7SL606P-201ENST00000472779 293 ntBASIC21.89■■□□□ 1.09
CHD1LQ86WJ1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CHD1LQ86WJ1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CHD1LQ86WJ1 PRORSD1P-202ENST00000563365 2154 ntBASIC21.89■■□□□ 1.09
CHD1LQ86WJ1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHD1LQ86WJ1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
CHD1LQ86WJ1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHD1LQ86WJ1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHD1LQ86WJ1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.89■■□□□ 1.09
CHD1LQ86WJ1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHD1LQ86WJ1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CHD1LQ86WJ1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHD1LQ86WJ1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHD1LQ86WJ1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHD1LQ86WJ1 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHD1LQ86WJ1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC21.88■■□□□ 1.09
CHD1LQ86WJ1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHD1LQ86WJ1 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC21.88■■□□□ 1.09
CHD1LQ86WJ1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
CHD1LQ86WJ1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC21.88■■□□□ 1.09
CHD1LQ86WJ1 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHD1LQ86WJ1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHD1LQ86WJ1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.88■■□□□ 1.09
CHD1LQ86WJ1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.88■■□□□ 1.09
CHD1LQ86WJ1 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CHD1LQ86WJ1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.88■■□□□ 1.09
CHD1LQ86WJ1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHD1LQ86WJ1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CHD1LQ86WJ1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC21.88■■□□□ 1.09
CHD1LQ86WJ1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC21.88■■□□□ 1.09
CHD1LQ86WJ1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHD1LQ86WJ1 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHD1LQ86WJ1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHD1LQ86WJ1 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHD1LQ86WJ1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHD1LQ86WJ1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHD1LQ86WJ1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CHD1LQ86WJ1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.88■■□□□ 1.09
CHD1LQ86WJ1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 TSPY22P-201ENST00000427496 604 ntBASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 LINC01238-205ENST00000567549 1107 ntBASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 AC022211.2-201ENST00000585075 2527 ntBASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHD1LQ86WJ1 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHD1LQ86WJ1 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.85■■□□□ 1.09
CHD1LQ86WJ1 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms