Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RTTNQ86VV8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.68■□□□□ 0.1
RTTNQ86VV8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.68■□□□□ 0.1
RTTNQ86VV8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RTTNQ86VV8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTTNQ86VV8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RTTNQ86VV8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTTNQ86VV8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTTNQ86VV8 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTTNQ86VV8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
RTTNQ86VV8 TSPY22P-201ENST00000427496 604 ntBASIC15.67■□□□□ 0.1
RTTNQ86VV8 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.67■□□□□ 0.1
RTTNQ86VV8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RTTNQ86VV8 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RTTNQ86VV8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RTTNQ86VV8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
RTTNQ86VV8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RTTNQ86VV8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.67■□□□□ 0.1
RTTNQ86VV8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.67■□□□□ 0.1
RTTNQ86VV8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RTTNQ86VV8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTTNQ86VV8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTTNQ86VV8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RTTNQ86VV8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RTTNQ86VV8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTTNQ86VV8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTTNQ86VV8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTTNQ86VV8 PRELID1P1-202ENST00000567272 903 ntBASIC15.67■□□□□ 0.1
RTTNQ86VV8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.67■□□□□ 0.1
RTTNQ86VV8 AC104692.2-201ENST00000603054 253 ntBASIC15.67■□□□□ 0.1
RTTNQ86VV8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.67■□□□□ 0.1
RTTNQ86VV8 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.67■□□□□ 0.1
RTTNQ86VV8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.67■□□□□ 0.1
RTTNQ86VV8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.67■□□□□ 0.1
RTTNQ86VV8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTTNQ86VV8 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.67■□□□□ 0.1
RTTNQ86VV8 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTTNQ86VV8 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RTTNQ86VV8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.67■□□□□ 0.1
RTTNQ86VV8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.67■□□□□ 0.1
RTTNQ86VV8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.66■□□□□ 0.1
RTTNQ86VV8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.66■□□□□ 0.1
RTTNQ86VV8 AC016734.2-201ENST00000624325 1377 ntBASIC15.66■□□□□ 0.1
RTTNQ86VV8 Z83836.1-201ENST00000624605 1642 ntBASIC15.66■□□□□ 0.1
RTTNQ86VV8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTTNQ86VV8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.66■□□□□ 0.1
RTTNQ86VV8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTTNQ86VV8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RTTNQ86VV8 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTTNQ86VV8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.66■□□□□ 0.1
RTTNQ86VV8 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RTTNQ86VV8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.66■□□□□ 0.1
RTTNQ86VV8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTTNQ86VV8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTTNQ86VV8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTTNQ86VV8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RTTNQ86VV8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.66■□□□□ 0.1
RTTNQ86VV8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.66■□□□□ 0.1
RTTNQ86VV8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTTNQ86VV8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTTNQ86VV8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTTNQ86VV8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RTTNQ86VV8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTTNQ86VV8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTTNQ86VV8 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RTTNQ86VV8 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RTTNQ86VV8 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTTNQ86VV8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RTTNQ86VV8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
RTTNQ86VV8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.66■□□□□ 0.1
RTTNQ86VV8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RTTNQ86VV8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTTNQ86VV8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.66■□□□□ 0.1
RTTNQ86VV8 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.66■□□□□ 0.1
RTTNQ86VV8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.66■□□□□ 0.1
RTTNQ86VV8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.66■□□□□ 0.1
RTTNQ86VV8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.66■□□□□ 0.1
RTTNQ86VV8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.66■□□□□ 0.1
RTTNQ86VV8 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.66■□□□□ 0.1
RTTNQ86VV8 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.66■□□□□ 0.1
RTTNQ86VV8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.66■□□□□ 0.1
RTTNQ86VV8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.66■□□□□ 0.1
RTTNQ86VV8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RTTNQ86VV8 GPR32P1-201ENST00000601788 811 ntBASIC15.66■□□□□ 0.1
RTTNQ86VV8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RTTNQ86VV8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RTTNQ86VV8 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RTTNQ86VV8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTTNQ86VV8 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTTNQ86VV8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTTNQ86VV8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.65■□□□□ 0.1
RTTNQ86VV8 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTTNQ86VV8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RTTNQ86VV8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTTNQ86VV8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.65■□□□□ 0.1
RTTNQ86VV8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RTTNQ86VV8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RTTNQ86VV8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTTNQ86VV8 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RTTNQ86VV8 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms