Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RGPD4Q7Z3J3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RGPD4Q7Z3J3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC22.21■■□□□ 1.15
RGPD4Q7Z3J3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
RGPD4Q7Z3J3 ANO7L1-203ENST00000602586 1720 ntBASIC22.21■■□□□ 1.15
RGPD4Q7Z3J3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC22.21■■□□□ 1.15
RGPD4Q7Z3J3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RGPD4Q7Z3J3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC22.21■■□□□ 1.15
RGPD4Q7Z3J3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC22.21■■□□□ 1.15
RGPD4Q7Z3J3 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RGPD4Q7Z3J3 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC22.21■■□□□ 1.15
RGPD4Q7Z3J3 MIR1909-201ENST00000411312 80 ntBASIC22.21■■□□□ 1.15
RGPD4Q7Z3J3 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC22.21■■□□□ 1.15
RGPD4Q7Z3J3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RGPD4Q7Z3J3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
RGPD4Q7Z3J3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC22.21■■□□□ 1.15
RGPD4Q7Z3J3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RGPD4Q7Z3J3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC22.21■■□□□ 1.15
RGPD4Q7Z3J3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.21■■□□□ 1.15
RGPD4Q7Z3J3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
RGPD4Q7Z3J3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
RGPD4Q7Z3J3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RGPD4Q7Z3J3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RGPD4Q7Z3J3 AC005082.1-201ENST00000413042 2259 ntBASIC22.21■■□□□ 1.15
RGPD4Q7Z3J3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
RGPD4Q7Z3J3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RGPD4Q7Z3J3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RGPD4Q7Z3J3 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RGPD4Q7Z3J3 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC22.2■■□□□ 1.14
RGPD4Q7Z3J3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC22.2■■□□□ 1.14
RGPD4Q7Z3J3 AC245100.3-201ENST00000441281 285 ntBASIC22.2■■□□□ 1.14
RGPD4Q7Z3J3 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC22.2■■□□□ 1.14
RGPD4Q7Z3J3 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC22.2■■□□□ 1.14
RGPD4Q7Z3J3 AC002558.1-201ENST00000488906 803 ntBASIC22.2■■□□□ 1.14
RGPD4Q7Z3J3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC22.2■■□□□ 1.14
RGPD4Q7Z3J3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RGPD4Q7Z3J3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC22.2■■□□□ 1.14
RGPD4Q7Z3J3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC22.2■■□□□ 1.14
RGPD4Q7Z3J3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RGPD4Q7Z3J3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC22.2■■□□□ 1.14
RGPD4Q7Z3J3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
RGPD4Q7Z3J3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC22.2■■□□□ 1.14
RGPD4Q7Z3J3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RGPD4Q7Z3J3 AL161645.1-201ENST00000622716 1255 ntBASIC22.2■■□□□ 1.14
RGPD4Q7Z3J3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC22.19■■□□□ 1.14
RGPD4Q7Z3J3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC22.19■■□□□ 1.14
RGPD4Q7Z3J3 AC100803.2-201ENST00000562459 1963 ntBASIC22.19■■□□□ 1.14
RGPD4Q7Z3J3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
RGPD4Q7Z3J3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RGPD4Q7Z3J3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RGPD4Q7Z3J3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
RGPD4Q7Z3J3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RGPD4Q7Z3J3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC22.19■■□□□ 1.14
RGPD4Q7Z3J3 SPTLC1P1-201ENST00000447199 261 ntBASIC22.19■■□□□ 1.14
RGPD4Q7Z3J3 IGHV3-52-201ENST00000519770 353 ntBASIC22.19■■□□□ 1.14
RGPD4Q7Z3J3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC22.19■■□□□ 1.14
RGPD4Q7Z3J3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RGPD4Q7Z3J3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC22.19■■□□□ 1.14
RGPD4Q7Z3J3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.19■■□□□ 1.14
RGPD4Q7Z3J3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC22.19■■□□□ 1.14
RGPD4Q7Z3J3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC22.19■■□□□ 1.14
RGPD4Q7Z3J3 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
RGPD4Q7Z3J3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC22.18■■□□□ 1.14
RGPD4Q7Z3J3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
RGPD4Q7Z3J3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
RGPD4Q7Z3J3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC22.18■■□□□ 1.14
RGPD4Q7Z3J3 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC22.18■■□□□ 1.14
RGPD4Q7Z3J3 ALG1L8P-201ENST00000533887 760 ntBASIC22.18■■□□□ 1.14
RGPD4Q7Z3J3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.18■■□□□ 1.14
RGPD4Q7Z3J3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
RGPD4Q7Z3J3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RGPD4Q7Z3J3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RGPD4Q7Z3J3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RGPD4Q7Z3J3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RGPD4Q7Z3J3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RGPD4Q7Z3J3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.18■■□□□ 1.14
RGPD4Q7Z3J3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RGPD4Q7Z3J3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RGPD4Q7Z3J3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
RGPD4Q7Z3J3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RGPD4Q7Z3J3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC22.17■■□□□ 1.14
RGPD4Q7Z3J3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC22.17■■□□□ 1.14
RGPD4Q7Z3J3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC22.17■■□□□ 1.14
RGPD4Q7Z3J3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
RGPD4Q7Z3J3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.17■■□□□ 1.14
RGPD4Q7Z3J3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
RGPD4Q7Z3J3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RGPD4Q7Z3J3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RGPD4Q7Z3J3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RGPD4Q7Z3J3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC22.17■■□□□ 1.14
RGPD4Q7Z3J3 ACA64.2-201ENST00000459014 129 ntBASIC22.17■■□□□ 1.14
RGPD4Q7Z3J3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC22.17■■□□□ 1.14
RGPD4Q7Z3J3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC22.17■■□□□ 1.14
RGPD4Q7Z3J3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
RGPD4Q7Z3J3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RGPD4Q7Z3J3 AC140912.1-201ENST00000577171 1054 ntBASIC22.17■■□□□ 1.14
RGPD4Q7Z3J3 AL009183.1-201ENST00000603760 355 ntBASIC22.17■■□□□ 1.14
RGPD4Q7Z3J3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC22.17■■□□□ 1.14
RGPD4Q7Z3J3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC22.17■■□□□ 1.14
RGPD4Q7Z3J3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms