Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.02■□□□□ 0.31
RNF44Q7L0R7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 DDX43P3-201ENST00000441064 443 ntBASIC17.01■□□□□ 0.31
RNF44Q7L0R7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 AC091304.2-201ENST00000564639 760 ntBASIC17.01■□□□□ 0.31
RNF44Q7L0R7 AC111152.3-201ENST00000569699 673 ntBASIC17.01■□□□□ 0.31
RNF44Q7L0R7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF44Q7L0R7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17■□□□□ 0.31
RNF44Q7L0R7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RNF44Q7L0R7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF44Q7L0R7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF44Q7L0R7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF44Q7L0R7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF44Q7L0R7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RNF44Q7L0R7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF44Q7L0R7 INTS4P1-201ENST00000438455 1935 ntBASIC17■□□□□ 0.31
RNF44Q7L0R7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF44Q7L0R7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF44Q7L0R7 AL390961.4-201ENST00000623958 2535 ntBASIC17■□□□□ 0.31
RNF44Q7L0R7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
RNF44Q7L0R7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF44Q7L0R7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF44Q7L0R7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RNF44Q7L0R7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RNF44Q7L0R7 FAM220CP-201ENST00000395253 831 ntBASIC17■□□□□ 0.31
RNF44Q7L0R7 RCN1P2-201ENST00000398357 915 ntBASIC17■□□□□ 0.31
RNF44Q7L0R7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17■□□□□ 0.31
RNF44Q7L0R7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17■□□□□ 0.31
RNF44Q7L0R7 AC010460.3-201ENST00000511359 1579 ntBASIC17■□□□□ 0.31
RNF44Q7L0R7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RNF44Q7L0R7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17■□□□□ 0.31
RNF44Q7L0R7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17■□□□□ 0.31
RNF44Q7L0R7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17■□□□□ 0.31
RNF44Q7L0R7 IFNL4P1-201ENST00000607083 540 ntBASIC17■□□□□ 0.31
RNF44Q7L0R7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17■□□□□ 0.31
RNF44Q7L0R7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RNF44Q7L0R7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF44Q7L0R7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17■□□□□ 0.31
RNF44Q7L0R7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RNF44Q7L0R7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF44Q7L0R7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RNF44Q7L0R7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17■□□□□ 0.31
RNF44Q7L0R7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF44Q7L0R7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF44Q7L0R7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF44Q7L0R7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RNF44Q7L0R7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF44Q7L0R7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF44Q7L0R7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RNF44Q7L0R7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF44Q7L0R7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF44Q7L0R7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF44Q7L0R7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF44Q7L0R7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF44Q7L0R7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms