Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PTCHD4Q6ZW05 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTCHD4Q6ZW05 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
PTCHD4Q6ZW05 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTCHD4Q6ZW05 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTCHD4Q6ZW05 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PTCHD4Q6ZW05 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTCHD4Q6ZW05 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
PTCHD4Q6ZW05 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTCHD4Q6ZW05 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTCHD4Q6ZW05 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTCHD4Q6ZW05 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 TSPY15P-201ENST00000457163 923 ntBASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 DUTP2-201ENST00000519164 463 ntBASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 AC009065.1-201ENST00000564055 1225 ntBASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 C2orf69P3-201ENST00000565542 1120 ntBASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 NFIC-211ENST00000641145 8399 ntBASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 AC100803.2-201ENST00000562459 1963 ntBASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTCHD4Q6ZW05 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 AC104390.1-201ENST00000555663 520 ntBASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 AL024508.2-201ENST00000607749 1894 ntBASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 AC112497.1-201ENST00000624824 639 ntBASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
PTCHD4Q6ZW05 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms