Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF549Q6P9A3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF549Q6P9A3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNF549Q6P9A3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF549Q6P9A3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF549Q6P9A3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF549Q6P9A3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNF549Q6P9A3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF549Q6P9A3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF549Q6P9A3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF549Q6P9A3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF549Q6P9A3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF549Q6P9A3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
ZNF549Q6P9A3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF549Q6P9A3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF549Q6P9A3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ZNF549Q6P9A3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF549Q6P9A3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNF549Q6P9A3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.6■□□□□ 0.41
ZNF549Q6P9A3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF549Q6P9A3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF549Q6P9A3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF549Q6P9A3 AL136038.3-201ENST00000561909 1096 ntBASIC17.6■□□□□ 0.41
ZNF549Q6P9A3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.6■□□□□ 0.41
ZNF549Q6P9A3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF549Q6P9A3 AL138688.1-201ENST00000624851 1594 ntBASIC17.6■□□□□ 0.41
ZNF549Q6P9A3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ZNF549Q6P9A3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNF549Q6P9A3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF549Q6P9A3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
ZNF549Q6P9A3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF549Q6P9A3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ZNF549Q6P9A3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF549Q6P9A3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF549Q6P9A3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF549Q6P9A3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF549Q6P9A3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF549Q6P9A3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF549Q6P9A3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.59■□□□□ 0.41
ZNF549Q6P9A3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF549Q6P9A3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF549Q6P9A3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF549Q6P9A3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.59■□□□□ 0.41
ZNF549Q6P9A3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.59■□□□□ 0.41
ZNF549Q6P9A3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.59■□□□□ 0.41
ZNF549Q6P9A3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF549Q6P9A3 LINC01451-201ENST00000623792 534 ntBASIC17.59■□□□□ 0.41
ZNF549Q6P9A3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF549Q6P9A3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF549Q6P9A3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ZNF549Q6P9A3 PKD1P1-201ENST00000458669 6805 ntBASIC17.59■□□□□ 0.41
ZNF549Q6P9A3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.59■□□□□ 0.41
ZNF549Q6P9A3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
ZNF549Q6P9A3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF549Q6P9A3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
ZNF549Q6P9A3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.58■□□□□ 0.41
ZNF549Q6P9A3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.58■□□□□ 0.41
ZNF549Q6P9A3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZNF549Q6P9A3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.58■□□□□ 0.41
ZNF549Q6P9A3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.58■□□□□ 0.41
ZNF549Q6P9A3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.58■□□□□ 0.41
ZNF549Q6P9A3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZNF549Q6P9A3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.58■□□□□ 0.41
ZNF549Q6P9A3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.58■□□□□ 0.41
ZNF549Q6P9A3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.58■□□□□ 0.41
ZNF549Q6P9A3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.58■□□□□ 0.41
ZNF549Q6P9A3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZNF549Q6P9A3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.58■□□□□ 0.41
ZNF549Q6P9A3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.58■□□□□ 0.41
ZNF549Q6P9A3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF549Q6P9A3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF549Q6P9A3 TSPY22P-201ENST00000427496 604 ntBASIC17.58■□□□□ 0.4
ZNF549Q6P9A3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.58■□□□□ 0.4
ZNF549Q6P9A3 RN7SL606P-201ENST00000472779 293 ntBASIC17.58■□□□□ 0.4
ZNF549Q6P9A3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF549Q6P9A3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
ZNF549Q6P9A3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.58■□□□□ 0.4
ZNF549Q6P9A3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.58■□□□□ 0.4
ZNF549Q6P9A3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
ZNF549Q6P9A3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF549Q6P9A3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF549Q6P9A3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF549Q6P9A3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF549Q6P9A3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF549Q6P9A3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF549Q6P9A3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF549Q6P9A3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
ZNF549Q6P9A3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF549Q6P9A3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
ZNF549Q6P9A3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF549Q6P9A3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF549Q6P9A3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF549Q6P9A3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF549Q6P9A3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.57■□□□□ 0.4
ZNF549Q6P9A3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms