Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TTC39BQ5VTQ0 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TTC39BQ5VTQ0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TTC39BQ5VTQ0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TTC39BQ5VTQ0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TTC39BQ5VTQ0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TTC39BQ5VTQ0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TTC39BQ5VTQ0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TTC39BQ5VTQ0 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TTC39BQ5VTQ0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
TTC39BQ5VTQ0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.48■□□□□ 0.55
TTC39BQ5VTQ0 MINOS1P3-201ENST00000457048 203 ntBASIC18.48■□□□□ 0.55
TTC39BQ5VTQ0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.48■□□□□ 0.55
TTC39BQ5VTQ0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.48■□□□□ 0.55
TTC39BQ5VTQ0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.48■□□□□ 0.55
TTC39BQ5VTQ0 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.48■□□□□ 0.55
TTC39BQ5VTQ0 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.48■□□□□ 0.55
TTC39BQ5VTQ0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.48■□□□□ 0.55
TTC39BQ5VTQ0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.48■□□□□ 0.55
TTC39BQ5VTQ0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TTC39BQ5VTQ0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TTC39BQ5VTQ0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TTC39BQ5VTQ0 NSUN5P1-202ENST00000421140 1535 ntBASIC18.48■□□□□ 0.55
TTC39BQ5VTQ0 NSUN5P2-203ENST00000457352 1529 ntBASIC18.48■□□□□ 0.55
TTC39BQ5VTQ0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TTC39BQ5VTQ0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TTC39BQ5VTQ0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.48■□□□□ 0.55
TTC39BQ5VTQ0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 AP005901.3-202ENST00000581653 237 ntBASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.47■□□□□ 0.55
TTC39BQ5VTQ0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 DUSP5P1-201ENST00000441325 1139 ntBASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 AL121772.3-201ENST00000610840 674 ntBASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC39BQ5VTQ0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms