Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.4■□□□□ 0.54
LRRC38Q5VT99 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.4■□□□□ 0.54
LRRC38Q5VT99 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.4■□□□□ 0.54
LRRC38Q5VT99 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.4■□□□□ 0.54
LRRC38Q5VT99 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC38Q5VT99 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC38Q5VT99 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.4■□□□□ 0.54
LRRC38Q5VT99 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC38Q5VT99 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC38Q5VT99 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC38Q5VT99 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
LRRC38Q5VT99 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.39■□□□□ 0.54
LRRC38Q5VT99 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRRC38Q5VT99 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRRC38Q5VT99 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
LRRC38Q5VT99 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.39■□□□□ 0.54
LRRC38Q5VT99 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRRC38Q5VT99 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRC38Q5VT99 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC38Q5VT99 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC38Q5VT99 AC010460.3-201ENST00000511359 1579 ntBASIC18.39■□□□□ 0.53
LRRC38Q5VT99 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LRRC38Q5VT99 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.39■□□□□ 0.53
LRRC38Q5VT99 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.39■□□□□ 0.53
LRRC38Q5VT99 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC38Q5VT99 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LRRC38Q5VT99 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC38Q5VT99 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LRRC38Q5VT99 RCN1P1-201ENST00000400413 996 ntBASIC18.39■□□□□ 0.53
LRRC38Q5VT99 AL645929.1-201ENST00000420084 975 ntBASIC18.39■□□□□ 0.53
LRRC38Q5VT99 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC38Q5VT99 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.39■□□□□ 0.53
LRRC38Q5VT99 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
LRRC38Q5VT99 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.39■□□□□ 0.53
LRRC38Q5VT99 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.39■□□□□ 0.53
LRRC38Q5VT99 DUX4L26-201ENST00000489078 1255 ntBASIC18.39■□□□□ 0.53
LRRC38Q5VT99 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRC38Q5VT99 GUSBP12-201ENST00000513727 720 ntBASIC18.39■□□□□ 0.53
LRRC38Q5VT99 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.39■□□□□ 0.53
LRRC38Q5VT99 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC38Q5VT99 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.39■□□□□ 0.53
LRRC38Q5VT99 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC38Q5VT99 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC38Q5VT99 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.39■□□□□ 0.53
LRRC38Q5VT99 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC38Q5VT99 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC38Q5VT99 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC38Q5VT99 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC38Q5VT99 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC38Q5VT99 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.38■□□□□ 0.53
LRRC38Q5VT99 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC38Q5VT99 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC38Q5VT99 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC38Q5VT99 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC38Q5VT99 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC38Q5VT99 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRC38Q5VT99 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC38Q5VT99 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC38Q5VT99 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC38Q5VT99 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC38Q5VT99 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC38Q5VT99 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRC38Q5VT99 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.38■□□□□ 0.53
LRRC38Q5VT99 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.38■□□□□ 0.53
LRRC38Q5VT99 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
LRRC38Q5VT99 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRC38Q5VT99 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LRRC38Q5VT99 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LRRC38Q5VT99 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
LRRC38Q5VT99 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC38Q5VT99 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC38Q5VT99 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRC38Q5VT99 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC38Q5VT99 AC080080.1-201ENST00000625121 2420 ntBASIC18.38■□□□□ 0.53
LRRC38Q5VT99 AL121761.2-201ENST00000598007 1648 ntBASIC18.38■□□□□ 0.53
LRRC38Q5VT99 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.38■□□□□ 0.53
LRRC38Q5VT99 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC38Q5VT99 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC38Q5VT99 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC38Q5VT99 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.37■□□□□ 0.53
LRRC38Q5VT99 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC38Q5VT99 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC38Q5VT99 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC38Q5VT99 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
LRRC38Q5VT99 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC38Q5VT99 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC38Q5VT99 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.37■□□□□ 0.53
LRRC38Q5VT99 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC38Q5VT99 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC38Q5VT99 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC38Q5VT99 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.37■□□□□ 0.53
LRRC38Q5VT99 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC38Q5VT99 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.37■□□□□ 0.53
LRRC38Q5VT99 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.37■□□□□ 0.53
LRRC38Q5VT99 AL136038.3-201ENST00000561909 1096 ntBASIC18.37■□□□□ 0.53
LRRC38Q5VT99 RN7SL850P-201ENST00000579959 291 ntBASIC18.37■□□□□ 0.53
LRRC38Q5VT99 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LRRC38Q5VT99 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
LRRC38Q5VT99 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC38Q5VT99 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms