Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.23■□□□□ 0.03
LRRK2Q5S007 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRK2Q5S007 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRK2Q5S007 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRK2Q5S007 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRK2Q5S007 AC103564.2-201ENST00000432853 1299 ntBASIC15.23■□□□□ 0.03
LRRK2Q5S007 GIMAP3P-201ENST00000495150 836 ntBASIC15.23■□□□□ 0.03
LRRK2Q5S007 AC079140.1-201ENST00000508039 487 ntBASIC15.23■□□□□ 0.03
LRRK2Q5S007 AC026150.2-201ENST00000564693 1156 ntBASIC15.23■□□□□ 0.03
LRRK2Q5S007 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRK2Q5S007 AL133338.1-201ENST00000565695 1517 ntBASIC15.23■□□□□ 0.03
LRRK2Q5S007 UXT-AS1-201ENST00000590504 1525 ntBASIC15.23■□□□□ 0.03
LRRK2Q5S007 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRK2Q5S007 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRK2Q5S007 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRK2Q5S007 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRK2Q5S007 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRK2Q5S007 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRK2Q5S007 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRK2Q5S007 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRK2Q5S007 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRK2Q5S007 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.22■□□□□ 0.03
LRRK2Q5S007 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRK2Q5S007 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRK2Q5S007 SPDYE14P-201ENST00000442619 822 ntBASIC15.22■□□□□ 0.03
LRRK2Q5S007 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.22■□□□□ 0.03
LRRK2Q5S007 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.22■□□□□ 0.03
LRRK2Q5S007 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.22■□□□□ 0.03
LRRK2Q5S007 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.22■□□□□ 0.03
LRRK2Q5S007 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRK2Q5S007 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
LRRK2Q5S007 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRK2Q5S007 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRK2Q5S007 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRK2Q5S007 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRK2Q5S007 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.22■□□□□ 0.03
LRRK2Q5S007 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRK2Q5S007 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRK2Q5S007 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRK2Q5S007 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRK2Q5S007 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.22■□□□□ 0.03
LRRK2Q5S007 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LRRK2Q5S007 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRK2Q5S007 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRK2Q5S007 MIR658-201ENST00000385210 100 ntBASIC15.22■□□□□ 0.03
LRRK2Q5S007 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
LRRK2Q5S007 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.22■□□□□ 0.03
LRRK2Q5S007 AL671277.1-201ENST00000429656 993 ntBASIC15.22■□□□□ 0.03
LRRK2Q5S007 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LRRK2Q5S007 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRK2Q5S007 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRK2Q5S007 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRK2Q5S007 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.22■□□□□ 0.03
LRRK2Q5S007 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.22■□□□□ 0.03
LRRK2Q5S007 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.22■□□□□ 0.03
LRRK2Q5S007 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.22■□□□□ 0.03
LRRK2Q5S007 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC15.22■□□□□ 0.03
LRRK2Q5S007 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LRRK2Q5S007 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.22■□□□□ 0.03
LRRK2Q5S007 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRK2Q5S007 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRK2Q5S007 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRK2Q5S007 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LRRK2Q5S007 AC138969.3-201ENST00000546612 1459 ntBASIC15.22■□□□□ 0.03
LRRK2Q5S007 AC138932.2-201ENST00000548268 1459 ntBASIC15.22■□□□□ 0.03
LRRK2Q5S007 AC126755.4-201ENST00000549796 1459 ntBASIC15.22■□□□□ 0.03
LRRK2Q5S007 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRK2Q5S007 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRK2Q5S007 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRK2Q5S007 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.21■□□□□ 0.03
LRRK2Q5S007 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRK2Q5S007 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRK2Q5S007 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.21■□□□□ 0.03
LRRK2Q5S007 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LRRK2Q5S007 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.21■□□□□ 0.03
LRRK2Q5S007 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.21■□□□□ 0.03
LRRK2Q5S007 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
LRRK2Q5S007 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC15.21■□□□□ 0.03
LRRK2Q5S007 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRK2Q5S007 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRK2Q5S007 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRK2Q5S007 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRK2Q5S007 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRK2Q5S007 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.21■□□□□ 0.03
LRRK2Q5S007 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRK2Q5S007 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRK2Q5S007 AC100803.2-201ENST00000562459 1963 ntBASIC15.21■□□□□ 0.03
LRRK2Q5S007 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRK2Q5S007 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRK2Q5S007 AC092658.1-201ENST00000505836 891 ntBASIC15.21■□□□□ 0.03
LRRK2Q5S007 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.21■□□□□ 0.03
LRRK2Q5S007 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRK2Q5S007 RAB43P1-201ENST00000561790 589 ntBASIC15.21■□□□□ 0.03
LRRK2Q5S007 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRK2Q5S007 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.21■□□□□ 0.03
LRRK2Q5S007 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.21■□□□□ 0.03
LRRK2Q5S007 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.21■□□□□ 0.03
LRRK2Q5S007 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.21■□□□□ 0.03
LRRK2Q5S007 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRK2Q5S007 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms