Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CERKLQ49MI3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CERKLQ49MI3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CERKLQ49MI3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CERKLQ49MI3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
CERKLQ49MI3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CERKLQ49MI3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CERKLQ49MI3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CERKLQ49MI3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CERKLQ49MI3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CERKLQ49MI3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CERKLQ49MI3 BX842568.4-201ENST00000421222 227 ntBASIC20.67■□□□□ 0.9
CERKLQ49MI3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.67■□□□□ 0.9
CERKLQ49MI3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.67■□□□□ 0.9
CERKLQ49MI3 IGHV3-52-201ENST00000519770 353 ntBASIC20.67■□□□□ 0.9
CERKLQ49MI3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CERKLQ49MI3 STK25P1-201ENST00000585406 838 ntBASIC20.67■□□□□ 0.9
CERKLQ49MI3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.67■□□□□ 0.9
CERKLQ49MI3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CERKLQ49MI3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CERKLQ49MI3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
CERKLQ49MI3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.67■□□□□ 0.9
CERKLQ49MI3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CERKLQ49MI3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CERKLQ49MI3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.67■□□□□ 0.9
CERKLQ49MI3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.67■□□□□ 0.9
CERKLQ49MI3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CERKLQ49MI3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CERKLQ49MI3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.66■□□□□ 0.9
CERKLQ49MI3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CERKLQ49MI3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CERKLQ49MI3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CERKLQ49MI3 STK19B-204ENST00000512515 211 ntBASIC20.66■□□□□ 0.9
CERKLQ49MI3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.66■□□□□ 0.9
CERKLQ49MI3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.66■□□□□ 0.9
CERKLQ49MI3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CERKLQ49MI3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.66■□□□□ 0.9
CERKLQ49MI3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CERKLQ49MI3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CERKLQ49MI3 FLJ13224-201ENST00000313737 1514 ntBASIC20.66■□□□□ 0.9
CERKLQ49MI3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CERKLQ49MI3 KRT18P55-202ENST00000578578 1546 ntBASIC20.66■□□□□ 0.9
CERKLQ49MI3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.66■□□□□ 0.9
CERKLQ49MI3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CERKLQ49MI3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.66■□□□□ 0.9
CERKLQ49MI3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CERKLQ49MI3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CERKLQ49MI3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.66■□□□□ 0.9
CERKLQ49MI3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.66■□□□□ 0.9
CERKLQ49MI3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CERKLQ49MI3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CERKLQ49MI3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CERKLQ49MI3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CERKLQ49MI3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.66■□□□□ 0.9
CERKLQ49MI3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CERKLQ49MI3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CERKLQ49MI3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CERKLQ49MI3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CERKLQ49MI3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CERKLQ49MI3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.65■□□□□ 0.9
CERKLQ49MI3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CERKLQ49MI3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CERKLQ49MI3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CERKLQ49MI3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CERKLQ49MI3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.65■□□□□ 0.9
CERKLQ49MI3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CERKLQ49MI3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.65■□□□□ 0.9
CERKLQ49MI3 NCF1C-201ENST00000438382 1427 ntBASIC20.65■□□□□ 0.9
CERKLQ49MI3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CERKLQ49MI3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CERKLQ49MI3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.65■□□□□ 0.9
CERKLQ49MI3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.65■□□□□ 0.9
CERKLQ49MI3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.65■□□□□ 0.9
CERKLQ49MI3 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.65■□□□□ 0.9
CERKLQ49MI3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CERKLQ49MI3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CERKLQ49MI3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.65■□□□□ 0.9
CERKLQ49MI3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.65■□□□□ 0.9
CERKLQ49MI3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
CERKLQ49MI3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CERKLQ49MI3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CERKLQ49MI3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CERKLQ49MI3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.65■□□□□ 0.9
CERKLQ49MI3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CERKLQ49MI3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CERKLQ49MI3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
CERKLQ49MI3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CERKLQ49MI3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.64■□□□□ 0.9
CERKLQ49MI3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
CERKLQ49MI3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CERKLQ49MI3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CERKLQ49MI3 AC006504.4-201ENST00000592118 1568 ntBASIC20.64■□□□□ 0.9
CERKLQ49MI3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
CERKLQ49MI3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
CERKLQ49MI3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CERKLQ49MI3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CERKLQ49MI3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CERKLQ49MI3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CERKLQ49MI3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CERKLQ49MI3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms