Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSR1Q2NL82 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
TSR1Q2NL82 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.46■□□□□ 0.71
TSR1Q2NL82 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSR1Q2NL82 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSR1Q2NL82 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TSR1Q2NL82 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.46■□□□□ 0.71
TSR1Q2NL82 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TSR1Q2NL82 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.46■□□□□ 0.71
TSR1Q2NL82 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TSR1Q2NL82 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSR1Q2NL82 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.46■□□□□ 0.71
TSR1Q2NL82 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.46■□□□□ 0.71
TSR1Q2NL82 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.46■□□□□ 0.71
TSR1Q2NL82 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.46■□□□□ 0.71
TSR1Q2NL82 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.46■□□□□ 0.71
TSR1Q2NL82 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.46■□□□□ 0.71
TSR1Q2NL82 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TSR1Q2NL82 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSR1Q2NL82 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TSR1Q2NL82 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TSR1Q2NL82 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSR1Q2NL82 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSR1Q2NL82 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TSR1Q2NL82 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSR1Q2NL82 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TSR1Q2NL82 AC100803.2-201ENST00000562459 1963 ntBASIC19.46■□□□□ 0.71
TSR1Q2NL82 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSR1Q2NL82 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TSR1Q2NL82 AC132938.6-201ENST00000623828 1655 ntBASIC19.46■□□□□ 0.71
TSR1Q2NL82 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TSR1Q2NL82 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.46■□□□□ 0.71
TSR1Q2NL82 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
TSR1Q2NL82 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
TSR1Q2NL82 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.45■□□□□ 0.7
TSR1Q2NL82 AC092338.2-201ENST00000568827 1415 ntBASIC19.45■□□□□ 0.7
TSR1Q2NL82 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSR1Q2NL82 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TSR1Q2NL82 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TSR1Q2NL82 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSR1Q2NL82 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.45■□□□□ 0.7
TSR1Q2NL82 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.45■□□□□ 0.7
TSR1Q2NL82 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TSR1Q2NL82 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.45■□□□□ 0.7
TSR1Q2NL82 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.45■□□□□ 0.7
TSR1Q2NL82 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TSR1Q2NL82 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.45■□□□□ 0.7
TSR1Q2NL82 AP003071.4-201ENST00000562276 1284 ntBASIC19.45■□□□□ 0.7
TSR1Q2NL82 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.45■□□□□ 0.7
TSR1Q2NL82 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
TSR1Q2NL82 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.45■□□□□ 0.7
TSR1Q2NL82 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSR1Q2NL82 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
TSR1Q2NL82 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSR1Q2NL82 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TSR1Q2NL82 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSR1Q2NL82 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TSR1Q2NL82 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSR1Q2NL82 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSR1Q2NL82 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TSR1Q2NL82 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TSR1Q2NL82 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.45■□□□□ 0.7
TSR1Q2NL82 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSR1Q2NL82 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSR1Q2NL82 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSR1Q2NL82 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
TSR1Q2NL82 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
TSR1Q2NL82 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSR1Q2NL82 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSR1Q2NL82 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TSR1Q2NL82 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSR1Q2NL82 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSR1Q2NL82 AC099398.1-201ENST00000567919 2776 ntBASIC19.44■□□□□ 0.7
TSR1Q2NL82 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSR1Q2NL82 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TSR1Q2NL82 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSR1Q2NL82 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.44■□□□□ 0.7
TSR1Q2NL82 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TSR1Q2NL82 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TSR1Q2NL82 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TSR1Q2NL82 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSR1Q2NL82 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.44■□□□□ 0.7
TSR1Q2NL82 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSR1Q2NL82 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TSR1Q2NL82 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSR1Q2NL82 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSR1Q2NL82 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSR1Q2NL82 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.44■□□□□ 0.7
TSR1Q2NL82 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TSR1Q2NL82 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.44■□□□□ 0.7
TSR1Q2NL82 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.44■□□□□ 0.7
TSR1Q2NL82 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.44■□□□□ 0.7
TSR1Q2NL82 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.44■□□□□ 0.7
TSR1Q2NL82 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSR1Q2NL82 CROCCP2-202ENST00000412962 2773 ntBASIC19.44■□□□□ 0.7
TSR1Q2NL82 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSR1Q2NL82 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.44■□□□□ 0.7
TSR1Q2NL82 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
TSR1Q2NL82 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TSR1Q2NL82 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms