Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DSC1Q08554 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
DSC1Q08554 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.76■□□□□ 0.59
DSC1Q08554 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DSC1Q08554 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.76■□□□□ 0.59
DSC1Q08554 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
DSC1Q08554 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.76■□□□□ 0.59
DSC1Q08554 AC002347.1-201ENST00000569543 541 ntBASIC18.76■□□□□ 0.59
DSC1Q08554 AC010327.4-202ENST00000591484 748 ntBASIC18.76■□□□□ 0.59
DSC1Q08554 AL353135.1-201ENST00000606729 504 ntBASIC18.76■□□□□ 0.59
DSC1Q08554 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
DSC1Q08554 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DSC1Q08554 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DSC1Q08554 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
DSC1Q08554 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DSC1Q08554 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
DSC1Q08554 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DSC1Q08554 GPR89P-201ENST00000407924 1495 ntBASIC18.76■□□□□ 0.59
DSC1Q08554 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DSC1Q08554 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DSC1Q08554 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DSC1Q08554 AC104581.1-202ENST00000635932 2618 ntBASIC18.75■□□□□ 0.59
DSC1Q08554 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
DSC1Q08554 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.75■□□□□ 0.59
DSC1Q08554 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
DSC1Q08554 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DSC1Q08554 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
DSC1Q08554 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DSC1Q08554 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
DSC1Q08554 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DSC1Q08554 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
DSC1Q08554 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.75■□□□□ 0.59
DSC1Q08554 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.75■□□□□ 0.59
DSC1Q08554 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.75■□□□□ 0.59
DSC1Q08554 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DSC1Q08554 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.75■□□□□ 0.59
DSC1Q08554 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.75■□□□□ 0.59
DSC1Q08554 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.75■□□□□ 0.59
DSC1Q08554 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.75■□□□□ 0.59
DSC1Q08554 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.75■□□□□ 0.59
DSC1Q08554 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.75■□□□□ 0.59
DSC1Q08554 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.75■□□□□ 0.59
DSC1Q08554 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DSC1Q08554 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.75■□□□□ 0.59
DSC1Q08554 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.75■□□□□ 0.59
DSC1Q08554 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.75■□□□□ 0.59
DSC1Q08554 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DSC1Q08554 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
DSC1Q08554 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
DSC1Q08554 AC097637.2-201ENST00000624096 1997 ntBASIC18.75■□□□□ 0.59
DSC1Q08554 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DSC1Q08554 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DSC1Q08554 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
DSC1Q08554 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DSC1Q08554 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
DSC1Q08554 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DSC1Q08554 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
DSC1Q08554 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.74■□□□□ 0.59
DSC1Q08554 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DSC1Q08554 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DSC1Q08554 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
DSC1Q08554 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DSC1Q08554 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
DSC1Q08554 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DSC1Q08554 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
DSC1Q08554 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
DSC1Q08554 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DSC1Q08554 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DSC1Q08554 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.74■□□□□ 0.59
DSC1Q08554 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DSC1Q08554 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
DSC1Q08554 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
DSC1Q08554 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DSC1Q08554 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.74■□□□□ 0.59
DSC1Q08554 AC023274.1-201ENST00000418278 595 ntBASIC18.74■□□□□ 0.59
DSC1Q08554 PRSS29P-201ENST00000440800 595 ntBASIC18.74■□□□□ 0.59
DSC1Q08554 VN2R19P-201ENST00000442399 1052 ntBASIC18.74■□□□□ 0.59
DSC1Q08554 DNAJB3-201ENST00000446806 729 ntBASIC18.74■□□□□ 0.59
DSC1Q08554 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DSC1Q08554 AC112482.1-201ENST00000492080 688 ntBASIC18.74■□□□□ 0.59
DSC1Q08554 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.74■□□□□ 0.59
DSC1Q08554 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.74■□□□□ 0.59
DSC1Q08554 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.74■□□□□ 0.59
DSC1Q08554 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.74■□□□□ 0.59
DSC1Q08554 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
DSC1Q08554 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.74■□□□□ 0.59
DSC1Q08554 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DSC1Q08554 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DSC1Q08554 AC138028.4-201ENST00000564984 1845 ntBASIC18.74■□□□□ 0.59
DSC1Q08554 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
DSC1Q08554 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DSC1Q08554 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
DSC1Q08554 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DSC1Q08554 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DSC1Q08554 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DSC1Q08554 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
DSC1Q08554 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DSC1Q08554 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
DSC1Q08554 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
DSC1Q08554 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms