Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CDR2Q01850 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDR2Q01850 SIRPAP1-201ENST00000448467 1770 ntBASIC18.91■□□□□ 0.62
CDR2Q01850 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CDR2Q01850 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDR2Q01850 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
CDR2Q01850 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDR2Q01850 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.9■□□□□ 0.62
CDR2Q01850 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDR2Q01850 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CDR2Q01850 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.9■□□□□ 0.62
CDR2Q01850 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.9■□□□□ 0.62
CDR2Q01850 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CDR2Q01850 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CDR2Q01850 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.9■□□□□ 0.62
CDR2Q01850 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDR2Q01850 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDR2Q01850 TSPY22P-201ENST00000427496 604 ntBASIC18.9■□□□□ 0.62
CDR2Q01850 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.9■□□□□ 0.62
CDR2Q01850 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.9■□□□□ 0.62
CDR2Q01850 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.9■□□□□ 0.62
CDR2Q01850 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.9■□□□□ 0.62
CDR2Q01850 AC108860.2-201ENST00000562760 2183 ntBASIC18.9■□□□□ 0.62
CDR2Q01850 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.9■□□□□ 0.62
CDR2Q01850 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDR2Q01850 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CDR2Q01850 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDR2Q01850 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.9■□□□□ 0.62
CDR2Q01850 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDR2Q01850 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.9■□□□□ 0.62
CDR2Q01850 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDR2Q01850 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDR2Q01850 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CDR2Q01850 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.62
CDR2Q01850 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CDR2Q01850 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDR2Q01850 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDR2Q01850 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDR2Q01850 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDR2Q01850 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.89■□□□□ 0.62
CDR2Q01850 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDR2Q01850 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.89■□□□□ 0.61
CDR2Q01850 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDR2Q01850 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.89■□□□□ 0.61
CDR2Q01850 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDR2Q01850 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.89■□□□□ 0.61
CDR2Q01850 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDR2Q01850 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDR2Q01850 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDR2Q01850 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CDR2Q01850 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDR2Q01850 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.89■□□□□ 0.61
CDR2Q01850 AC011498.5-201ENST00000592027 486 ntBASIC18.89■□□□□ 0.61
CDR2Q01850 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDR2Q01850 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CDR2Q01850 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDR2Q01850 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDR2Q01850 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDR2Q01850 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CDR2Q01850 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDR2Q01850 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDR2Q01850 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDR2Q01850 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDR2Q01850 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.89■□□□□ 0.61
CDR2Q01850 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDR2Q01850 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CDR2Q01850 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.88■□□□□ 0.61
CDR2Q01850 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDR2Q01850 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CDR2Q01850 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDR2Q01850 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CDR2Q01850 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.88■□□□□ 0.61
CDR2Q01850 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDR2Q01850 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDR2Q01850 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.88■□□□□ 0.61
CDR2Q01850 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.88■□□□□ 0.61
CDR2Q01850 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDR2Q01850 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDR2Q01850 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDR2Q01850 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDR2Q01850 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDR2Q01850 AC005104.2-201ENST00000427818 678 ntBASIC18.88■□□□□ 0.61
CDR2Q01850 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDR2Q01850 RN7SL606P-201ENST00000472779 293 ntBASIC18.88■□□□□ 0.61
CDR2Q01850 GUSBP12-201ENST00000513727 720 ntBASIC18.88■□□□□ 0.61
CDR2Q01850 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CDR2Q01850 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.88■□□□□ 0.61
CDR2Q01850 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDR2Q01850 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.88■□□□□ 0.61
CDR2Q01850 AC097374.2-201ENST00000618617 1306 ntBASIC18.88■□□□□ 0.61
CDR2Q01850 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDR2Q01850 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDR2Q01850 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDR2Q01850 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDR2Q01850 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDR2Q01850 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDR2Q01850 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.88■□□□□ 0.61
CDR2Q01850 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDR2Q01850 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDR2Q01850 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms