Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK3Q00526 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDK3Q00526 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.42■□□□□ 0.38
CDK3Q00526 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.42■□□□□ 0.38
CDK3Q00526 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CDK3Q00526 AC079776.2-201ENST00000641154 1609 ntBASIC17.42■□□□□ 0.38
CDK3Q00526 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK3Q00526 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK3Q00526 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK3Q00526 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDK3Q00526 HLA-A-201ENST00000376802 1334 ntBASIC17.42■□□□□ 0.38
CDK3Q00526 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK3Q00526 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.42■□□□□ 0.38
CDK3Q00526 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK3Q00526 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDK3Q00526 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.41■□□□□ 0.38
CDK3Q00526 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK3Q00526 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CDK3Q00526 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK3Q00526 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
CDK3Q00526 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDK3Q00526 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK3Q00526 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK3Q00526 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK3Q00526 AL390961.4-201ENST00000623958 2535 ntBASIC17.41■□□□□ 0.38
CDK3Q00526 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CDK3Q00526 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.41■□□□□ 0.38
CDK3Q00526 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDK3Q00526 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK3Q00526 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
CDK3Q00526 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.41■□□□□ 0.38
CDK3Q00526 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.41■□□□□ 0.38
CDK3Q00526 RNA5SP419-201ENST00000515908 135 ntBASIC17.41■□□□□ 0.38
CDK3Q00526 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.41■□□□□ 0.38
CDK3Q00526 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.41■□□□□ 0.38
CDK3Q00526 AC109462.3-201ENST00000573934 613 ntBASIC17.41■□□□□ 0.38
CDK3Q00526 NKAPP1-205ENST00000585790 367 ntBASIC17.41■□□□□ 0.38
CDK3Q00526 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDK3Q00526 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK3Q00526 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.41■□□□□ 0.38
CDK3Q00526 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
CDK3Q00526 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDK3Q00526 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK3Q00526 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.41■□□□□ 0.38
CDK3Q00526 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK3Q00526 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CDK3Q00526 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK3Q00526 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK3Q00526 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDK3Q00526 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CDK3Q00526 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
CDK3Q00526 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDK3Q00526 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDK3Q00526 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CDK3Q00526 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK3Q00526 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.4■□□□□ 0.38
CDK3Q00526 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK3Q00526 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDK3Q00526 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDK3Q00526 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK3Q00526 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK3Q00526 SPDYE21P-201ENST00000413323 827 ntBASIC17.4■□□□□ 0.38
CDK3Q00526 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK3Q00526 AL031284.1-201ENST00000419297 478 ntBASIC17.4■□□□□ 0.38
CDK3Q00526 AC079776.4-201ENST00000511039 504 ntBASIC17.4■□□□□ 0.38
CDK3Q00526 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.4■□□□□ 0.38
CDK3Q00526 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.4■□□□□ 0.38
CDK3Q00526 AP001005.1-201ENST00000571755 1248 ntBASIC17.4■□□□□ 0.38
CDK3Q00526 AC073592.4-201ENST00000623827 446 ntBASIC17.4■□□□□ 0.38
CDK3Q00526 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.4■□□□□ 0.38
CDK3Q00526 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK3Q00526 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.4■□□□□ 0.38
CDK3Q00526 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.4■□□□□ 0.38
CDK3Q00526 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDK3Q00526 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK3Q00526 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.4■□□□□ 0.38
CDK3Q00526 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK3Q00526 AC132938.5-201ENST00000624980 1813 ntBASIC17.4■□□□□ 0.38
CDK3Q00526 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK3Q00526 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK3Q00526 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDK3Q00526 SIGLEC16-201ENST00000599858 1437 ntBASIC17.39■□□□□ 0.38
CDK3Q00526 BCL2-203ENST00000589955 5011 ntBASIC17.39■□□□□ 0.37
CDK3Q00526 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK3Q00526 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK3Q00526 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.39■□□□□ 0.37
CDK3Q00526 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.39■□□□□ 0.37
CDK3Q00526 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK3Q00526 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
CDK3Q00526 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.39■□□□□ 0.37
CDK3Q00526 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.39■□□□□ 0.37
CDK3Q00526 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.39■□□□□ 0.37
CDK3Q00526 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CDK3Q00526 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.39■□□□□ 0.37
CDK3Q00526 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CDK3Q00526 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK3Q00526 BX005266.1-201ENST00000473402 457 ntBASIC17.39■□□□□ 0.37
CDK3Q00526 IGHV3-52-201ENST00000519770 353 ntBASIC17.39■□□□□ 0.37
CDK3Q00526 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.39■□□□□ 0.37
CDK3Q00526 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms