Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 LINC01451-201ENST00000623792 534 ntBASIC13.98□□□□□ -0.17
CCL20P78556 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
CCL20P78556 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.98□□□□□ -0.17
CCL20P78556 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.98□□□□□ -0.17
CCL20P78556 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CCL20P78556 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL20P78556 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.98□□□□□ -0.17
CCL20P78556 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CCL20P78556 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL20P78556 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL20P78556 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL20P78556 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CCL20P78556 AC078925.2-201ENST00000624013 1973 ntBASIC13.98□□□□□ -0.17
CCL20P78556 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL20P78556 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL20P78556 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.98□□□□□ -0.17
CCL20P78556 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CCL20P78556 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.97□□□□□ -0.17
CCL20P78556 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.97□□□□□ -0.17
CCL20P78556 DBET-201ENST00000630918 3363 ntBASIC13.97□□□□□ -0.17
CCL20P78556 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL20P78556 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL20P78556 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL20P78556 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL20P78556 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
CCL20P78556 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL20P78556 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.97□□□□□ -0.17
CCL20P78556 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL20P78556 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL20P78556 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL20P78556 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
CCL20P78556 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
CCL20P78556 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC13.97□□□□□ -0.17
CCL20P78556 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL20P78556 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
CCL20P78556 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL20P78556 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL20P78556 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC13.97□□□□□ -0.17
CCL20P78556 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL20P78556 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL20P78556 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL20P78556 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CCL20P78556 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.97□□□□□ -0.17
CCL20P78556 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC13.97□□□□□ -0.17
CCL20P78556 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
CCL20P78556 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC13.97□□□□□ -0.17
CCL20P78556 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC13.97□□□□□ -0.17
CCL20P78556 AC008622.2-201ENST00000617006 1229 ntBASIC13.97□□□□□ -0.17
CCL20P78556 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC13.97□□□□□ -0.17
CCL20P78556 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL20P78556 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL20P78556 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL20P78556 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL20P78556 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.97□□□□□ -0.17
CCL20P78556 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL20P78556 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CCL20P78556 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL20P78556 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL20P78556 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL20P78556 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCL20P78556 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL20P78556 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL20P78556 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL20P78556 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CCL20P78556 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL20P78556 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCL20P78556 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL20P78556 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCL20P78556 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL20P78556 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL20P78556 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL20P78556 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCL20P78556 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL20P78556 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCL20P78556 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL20P78556 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL20P78556 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCL20P78556 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL20P78556 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC13.96□□□□□ -0.17
CCL20P78556 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL20P78556 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC13.96□□□□□ -0.17
CCL20P78556 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CCL20P78556 AC006015.1-201ENST00000429970 570 ntBASIC13.96□□□□□ -0.17
CCL20P78556 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.96□□□□□ -0.17
CCL20P78556 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.96□□□□□ -0.17
CCL20P78556 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCL20P78556 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13.96□□□□□ -0.17
CCL20P78556 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC13.96□□□□□ -0.17
CCL20P78556 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC13.96□□□□□ -0.17
CCL20P78556 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.96□□□□□ -0.17
CCL20P78556 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL20P78556 AC092118.2-201ENST00000613495 667 ntBASIC13.96□□□□□ -0.17
CCL20P78556 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CCL20P78556 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CCL20P78556 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL20P78556 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCL20P78556 AC046185.3-201ENST00000623228 1824 ntBASIC13.96□□□□□ -0.17
CCL20P78556 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL20P78556 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL20P78556 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms