Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.32□□□□□ -0.12
CX3CL1P78423 DUTP2-201ENST00000519164 463 ntBASIC14.32□□□□□ -0.12
CX3CL1P78423 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.32□□□□□ -0.12
CX3CL1P78423 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
CX3CL1P78423 AC004263.2-201ENST00000617183 678 ntBASIC14.32□□□□□ -0.12
CX3CL1P78423 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CX3CL1P78423 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CX3CL1P78423 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CX3CL1P78423 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.32□□□□□ -0.12
CX3CL1P78423 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CX3CL1P78423 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CX3CL1P78423 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CX3CL1P78423 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CX3CL1P78423 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CX3CL1P78423 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CX3CL1P78423 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CX3CL1P78423 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CX3CL1P78423 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CX3CL1P78423 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.32□□□□□ -0.12
CX3CL1P78423 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CL1P78423 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CL1P78423 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.31□□□□□ -0.12
CX3CL1P78423 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CL1P78423 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CL1P78423 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CL1P78423 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CL1P78423 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CL1P78423 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CL1P78423 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.31□□□□□ -0.12
CX3CL1P78423 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CL1P78423 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.31□□□□□ -0.12
CX3CL1P78423 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CX3CL1P78423 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.31□□□□□ -0.12
CX3CL1P78423 AL645929.1-201ENST00000420084 975 ntBASIC14.31□□□□□ -0.12
CX3CL1P78423 AL136038.3-201ENST00000561909 1096 ntBASIC14.31□□□□□ -0.12
CX3CL1P78423 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.31□□□□□ -0.12
CX3CL1P78423 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.31□□□□□ -0.12
CX3CL1P78423 AC005332.3-201ENST00000589904 676 ntBASIC14.31□□□□□ -0.12
CX3CL1P78423 GPR32P1-201ENST00000601788 811 ntBASIC14.31□□□□□ -0.12
CX3CL1P78423 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CL1P78423 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CL1P78423 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CL1P78423 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.31□□□□□ -0.12
CX3CL1P78423 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CL1P78423 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CL1P78423 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CL1P78423 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CL1P78423 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CL1P78423 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.31□□□□□ -0.12
CX3CL1P78423 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
CX3CL1P78423 AL353692.3-201ENST00000407031 1396 ntBASIC14.31□□□□□ -0.12
CX3CL1P78423 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.31□□□□□ -0.12
CX3CL1P78423 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CX3CL1P78423 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CL1P78423 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CL1P78423 NFIC-211ENST00000641145 8399 ntBASIC14.31□□□□□ -0.12
CX3CL1P78423 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CX3CL1P78423 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CX3CL1P78423 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.31□□□□□ -0.12
CX3CL1P78423 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.31□□□□□ -0.12
CX3CL1P78423 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CL1P78423 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CL1P78423 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.3□□□□□ -0.12
CX3CL1P78423 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CL1P78423 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CL1P78423 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CL1P78423 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CL1P78423 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CX3CL1P78423 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CL1P78423 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CL1P78423 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CL1P78423 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
CX3CL1P78423 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CX3CL1P78423 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CL1P78423 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CL1P78423 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CL1P78423 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CL1P78423 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CL1P78423 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CL1P78423 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.3□□□□□ -0.12
CX3CL1P78423 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CL1P78423 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.3□□□□□ -0.12
CX3CL1P78423 SLC25A6P5-201ENST00000435663 894 ntBASIC14.3□□□□□ -0.12
CX3CL1P78423 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.3□□□□□ -0.12
CX3CL1P78423 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.3□□□□□ -0.12
CX3CL1P78423 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.3□□□□□ -0.12
CX3CL1P78423 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.3□□□□□ -0.12
CX3CL1P78423 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.3□□□□□ -0.12
CX3CL1P78423 RNF126P1-202ENST00000569893 925 ntBASIC14.3□□□□□ -0.12
CX3CL1P78423 AC087388.1-201ENST00000571370 1112 ntBASIC14.3□□□□□ -0.12
CX3CL1P78423 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.3□□□□□ -0.12
CX3CL1P78423 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.3□□□□□ -0.12
CX3CL1P78423 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.3□□□□□ -0.12
CX3CL1P78423 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.3□□□□□ -0.12
CX3CL1P78423 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.3□□□□□ -0.12
CX3CL1P78423 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CX3CL1P78423 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CL1P78423 AC022898.2-201ENST00000616822 1312 ntBASIC14.3□□□□□ -0.12
CX3CL1P78423 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CX3CL1P78423 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms