Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.82■□□□□ 0.12
ACTA1P68133 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
ACTA1P68133 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ACTA1P68133 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
ACTA1P68133 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
ACTA1P68133 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ACTA1P68133 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ACTA1P68133 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ACTA1P68133 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ACTA1P68133 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ACTA1P68133 MIR718-201ENST00000390190 70 ntBASIC15.82■□□□□ 0.12
ACTA1P68133 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.82■□□□□ 0.12
ACTA1P68133 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.82■□□□□ 0.12
ACTA1P68133 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.82■□□□□ 0.12
ACTA1P68133 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ACTA1P68133 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.82■□□□□ 0.12
ACTA1P68133 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ACTA1P68133 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ACTA1P68133 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ACTA1P68133 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ACTA1P68133 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.82■□□□□ 0.12
ACTA1P68133 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ACTA1P68133 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.82■□□□□ 0.12
ACTA1P68133 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
ACTA1P68133 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ACTA1P68133 AL118508.1-201ENST00000613502 2345 ntBASIC15.82■□□□□ 0.12
ACTA1P68133 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ACTA1P68133 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ACTA1P68133 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ACTA1P68133 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
ACTA1P68133 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ACTA1P68133 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ACTA1P68133 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ACTA1P68133 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ACTA1P68133 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ACTA1P68133 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ACTA1P68133 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ACTA1P68133 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ACTA1P68133 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ACTA1P68133 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ACTA1P68133 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ACTA1P68133 PVRIG2P-201ENST00000435460 978 ntBASIC15.81■□□□□ 0.12
ACTA1P68133 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ACTA1P68133 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ACTA1P68133 KRT18P65-201ENST00000439811 1286 ntBASIC15.81■□□□□ 0.12
ACTA1P68133 RBM17P1-201ENST00000453646 1190 ntBASIC15.81■□□□□ 0.12
ACTA1P68133 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.81■□□□□ 0.12
ACTA1P68133 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ACTA1P68133 AC008550.1-201ENST00000511500 884 ntBASIC15.81■□□□□ 0.12
ACTA1P68133 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.81■□□□□ 0.12
ACTA1P68133 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.81■□□□□ 0.12
ACTA1P68133 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.81■□□□□ 0.12
ACTA1P68133 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.81■□□□□ 0.12
ACTA1P68133 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ACTA1P68133 MIR3917-201ENST00000580971 93 ntBASIC15.81■□□□□ 0.12
ACTA1P68133 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ACTA1P68133 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
ACTA1P68133 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ACTA1P68133 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.81■□□□□ 0.12
ACTA1P68133 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ACTA1P68133 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ACTA1P68133 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.81■□□□□ 0.12
ACTA1P68133 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ACTA1P68133 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ACTA1P68133 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ACTA1P68133 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.8■□□□□ 0.12
ACTA1P68133 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ACTA1P68133 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ACTA1P68133 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ACTA1P68133 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.8■□□□□ 0.12
ACTA1P68133 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ACTA1P68133 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
ACTA1P68133 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ACTA1P68133 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ACTA1P68133 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ACTA1P68133 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
ACTA1P68133 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.8■□□□□ 0.12
ACTA1P68133 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ACTA1P68133 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ACTA1P68133 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ACTA1P68133 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.8■□□□□ 0.12
ACTA1P68133 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ACTA1P68133 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ACTA1P68133 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ACTA1P68133 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.8■□□□□ 0.12
ACTA1P68133 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.8■□□□□ 0.12
ACTA1P68133 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.8■□□□□ 0.12
ACTA1P68133 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.8■□□□□ 0.12
ACTA1P68133 FITM1-202ENST00000559294 800 ntBASIC15.8■□□□□ 0.12
ACTA1P68133 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.8■□□□□ 0.12
ACTA1P68133 AL512604.3-201ENST00000569583 964 ntBASIC15.8■□□□□ 0.12
ACTA1P68133 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.8■□□□□ 0.12
ACTA1P68133 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ACTA1P68133 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.8■□□□□ 0.12
ACTA1P68133 AC024243.1-201ENST00000609234 778 ntBASIC15.8■□□□□ 0.12
ACTA1P68133 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ACTA1P68133 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ACTA1P68133 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ACTA1P68133 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ACTA1P68133 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms