Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.68■□□□□ 0.26
RPS3AP61247 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS3AP61247 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.67■□□□□ 0.26
RPS3AP61247 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RPS3AP61247 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.67■□□□□ 0.26
RPS3AP61247 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS3AP61247 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS3AP61247 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS3AP61247 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RPS3AP61247 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS3AP61247 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS3AP61247 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPS3AP61247 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS3AP61247 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.67■□□□□ 0.26
RPS3AP61247 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPS3AP61247 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPS3AP61247 AP000593.1-201ENST00000393668 712 ntBASIC16.67■□□□□ 0.26
RPS3AP61247 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.67■□□□□ 0.26
RPS3AP61247 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.67■□□□□ 0.26
RPS3AP61247 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.67■□□□□ 0.26
RPS3AP61247 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RPS3AP61247 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
RPS3AP61247 MYC-208ENST00000641036 567 ntBASIC16.67■□□□□ 0.26
RPS3AP61247 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.67■□□□□ 0.26
RPS3AP61247 AL357033.4-201ENST00000617703 1807 ntBASIC16.67■□□□□ 0.26
RPS3AP61247 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPS3AP61247 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS3AP61247 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS3AP61247 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS3AP61247 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.67■□□□□ 0.26
RPS3AP61247 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS3AP61247 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RPS3AP61247 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.66■□□□□ 0.26
RPS3AP61247 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS3AP61247 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS3AP61247 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPS3AP61247 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
RPS3AP61247 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS3AP61247 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.66■□□□□ 0.26
RPS3AP61247 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS3AP61247 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS3AP61247 REXO1L9P-201ENST00000604264 2108 ntBASIC16.66■□□□□ 0.26
RPS3AP61247 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RPS3AP61247 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS3AP61247 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS3AP61247 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.66■□□□□ 0.26
RPS3AP61247 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPS3AP61247 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.66■□□□□ 0.26
RPS3AP61247 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.66■□□□□ 0.26
RPS3AP61247 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.66■□□□□ 0.26
RPS3AP61247 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPS3AP61247 SEC1P-202ENST00000473944 940 ntBASIC16.66■□□□□ 0.26
RPS3AP61247 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS3AP61247 AC104390.1-201ENST00000555663 520 ntBASIC16.66■□□□□ 0.26
RPS3AP61247 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.66■□□□□ 0.26
RPS3AP61247 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RPS3AP61247 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS3AP61247 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RPS3AP61247 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPS3AP61247 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.66■□□□□ 0.26
RPS3AP61247 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS3AP61247 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS3AP61247 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS3AP61247 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS3AP61247 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPS3AP61247 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS3AP61247 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RPS3AP61247 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.66■□□□□ 0.26
RPS3AP61247 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RPS3AP61247 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.65■□□□□ 0.26
RPS3AP61247 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RPS3AP61247 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS3AP61247 AC093677.2-201ENST00000600169 1863 ntBASIC16.65■□□□□ 0.26
RPS3AP61247 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS3AP61247 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS3AP61247 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS3AP61247 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS3AP61247 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RPS3AP61247 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS3AP61247 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
RPS3AP61247 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS3AP61247 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS3AP61247 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.65■□□□□ 0.26
RPS3AP61247 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.65■□□□□ 0.26
RPS3AP61247 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS3AP61247 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS3AP61247 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.65■□□□□ 0.26
RPS3AP61247 AL671277.2-201ENST00000458060 996 ntBASIC16.65■□□□□ 0.26
RPS3AP61247 RASA4DP-201ENST00000460726 1199 ntBASIC16.65■□□□□ 0.26
RPS3AP61247 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.65■□□□□ 0.26
RPS3AP61247 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.65■□□□□ 0.26
RPS3AP61247 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.65■□□□□ 0.26
RPS3AP61247 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS3AP61247 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.65■□□□□ 0.26
RPS3AP61247 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.65■□□□□ 0.26
RPS3AP61247 MIR3180-4-201ENST00000582223 153 ntBASIC16.65■□□□□ 0.26
RPS3AP61247 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.65■□□□□ 0.26
RPS3AP61247 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.65■□□□□ 0.26
RPS3AP61247 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS3AP61247 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms