Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CXCR4P61073 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.18■□□□□ 0.18
CXCR4P61073 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CXCR4P61073 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CXCR4P61073 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CXCR4P61073 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CXCR4P61073 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.18■□□□□ 0.18
CXCR4P61073 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CXCR4P61073 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CXCR4P61073 PCDHA1-201ENST00000378133 2726 ntBASIC16.18■□□□□ 0.18
CXCR4P61073 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CXCR4P61073 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
CXCR4P61073 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CXCR4P61073 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.17■□□□□ 0.18
CXCR4P61073 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.17■□□□□ 0.18
CXCR4P61073 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CXCR4P61073 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.17■□□□□ 0.18
CXCR4P61073 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
CXCR4P61073 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CXCR4P61073 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CXCR4P61073 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CXCR4P61073 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
CXCR4P61073 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CXCR4P61073 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CXCR4P61073 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CXCR4P61073 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.17■□□□□ 0.18
CXCR4P61073 NUDT16P1-203ENST00000513809 620 ntBASIC16.17■□□□□ 0.18
CXCR4P61073 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.17■□□□□ 0.18
CXCR4P61073 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.17■□□□□ 0.18
CXCR4P61073 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.17■□□□□ 0.18
CXCR4P61073 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.17■□□□□ 0.18
CXCR4P61073 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CXCR4P61073 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CXCR4P61073 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CXCR4P61073 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
CXCR4P61073 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CXCR4P61073 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
CXCR4P61073 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CXCR4P61073 AC116353.5-201ENST00000638148 1699 ntBASIC16.17■□□□□ 0.18
CXCR4P61073 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.17■□□□□ 0.18
CXCR4P61073 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.17■□□□□ 0.18
CXCR4P61073 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CXCR4P61073 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CXCR4P61073 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CXCR4P61073 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.17■□□□□ 0.18
CXCR4P61073 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CXCR4P61073 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CXCR4P61073 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.17■□□□□ 0.18
CXCR4P61073 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CXCR4P61073 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CXCR4P61073 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
CXCR4P61073 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CXCR4P61073 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CXCR4P61073 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CXCR4P61073 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CXCR4P61073 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CXCR4P61073 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CXCR4P61073 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CXCR4P61073 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.16■□□□□ 0.18
CXCR4P61073 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.16■□□□□ 0.18
CXCR4P61073 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CXCR4P61073 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CXCR4P61073 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
CXCR4P61073 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
CXCR4P61073 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CXCR4P61073 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.16■□□□□ 0.18
CXCR4P61073 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CXCR4P61073 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CXCR4P61073 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CXCR4P61073 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CXCR4P61073 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.16■□□□□ 0.18
CXCR4P61073 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.16■□□□□ 0.18
CXCR4P61073 MIR4674-201ENST00000582457 87 ntBASIC16.16■□□□□ 0.18
CXCR4P61073 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.16■□□□□ 0.18
CXCR4P61073 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CXCR4P61073 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CXCR4P61073 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CXCR4P61073 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CXCR4P61073 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.16■□□□□ 0.18
CXCR4P61073 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CXCR4P61073 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CXCR4P61073 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CXCR4P61073 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CXCR4P61073 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CXCR4P61073 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CXCR4P61073 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.16■□□□□ 0.18
CXCR4P61073 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.16■□□□□ 0.18
CXCR4P61073 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CXCR4P61073 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CXCR4P61073 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CXCR4P61073 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CXCR4P61073 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.15■□□□□ 0.18
CXCR4P61073 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CXCR4P61073 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CXCR4P61073 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CXCR4P61073 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CXCR4P61073 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CXCR4P61073 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CXCR4P61073 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
CXCR4P61073 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms