Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDC42P60953 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC42P60953 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CDC42P60953 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC42P60953 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CDC42P60953 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.23■□□□□ 0.19
CDC42P60953 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.23■□□□□ 0.19
CDC42P60953 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.23■□□□□ 0.19
CDC42P60953 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CDC42P60953 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.23■□□□□ 0.19
CDC42P60953 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CDC42P60953 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC42P60953 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.23■□□□□ 0.19
CDC42P60953 C1QBPP2-201ENST00000528754 825 ntBASIC16.23■□□□□ 0.19
CDC42P60953 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.23■□□□□ 0.19
CDC42P60953 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.23■□□□□ 0.19
CDC42P60953 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.23■□□□□ 0.19
CDC42P60953 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.23■□□□□ 0.19
CDC42P60953 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDC42P60953 AC112497.1-201ENST00000624824 639 ntBASIC16.23■□□□□ 0.19
CDC42P60953 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CDC42P60953 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.23■□□□□ 0.19
CDC42P60953 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CDC42P60953 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDC42P60953 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC42P60953 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDC42P60953 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.23■□□□□ 0.19
CDC42P60953 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC42P60953 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC42P60953 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC42P60953 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC42P60953 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.22■□□□□ 0.19
CDC42P60953 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC42P60953 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC42P60953 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC42P60953 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC42P60953 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC42P60953 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC42P60953 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC42P60953 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.22■□□□□ 0.19
CDC42P60953 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.22■□□□□ 0.19
CDC42P60953 WWOX-216ENST00000569818 525 ntBASIC16.22■□□□□ 0.19
CDC42P60953 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC42P60953 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC42P60953 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CDC42P60953 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC42P60953 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC42P60953 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC42P60953 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC42P60953 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CDC42P60953 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CDC42P60953 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
CDC42P60953 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC42P60953 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC42P60953 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC42P60953 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
CDC42P60953 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CDC42P60953 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC42P60953 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.21■□□□□ 0.19
CDC42P60953 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC42P60953 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CDC42P60953 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDC42P60953 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC42P60953 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC42P60953 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC42P60953 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
CDC42P60953 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC42P60953 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC42P60953 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDC42P60953 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC42P60953 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.21■□□□□ 0.19
CDC42P60953 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CDC42P60953 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CDC42P60953 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC42P60953 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
CDC42P60953 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDC42P60953 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.21■□□□□ 0.19
CDC42P60953 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC42P60953 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC42P60953 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC42P60953 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC42P60953 FAM197Y1-201ENST00000421178 764 ntBASIC16.21■□□□□ 0.19
CDC42P60953 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.21■□□□□ 0.19
CDC42P60953 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC42P60953 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.21■□□□□ 0.19
CDC42P60953 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.21■□□□□ 0.19
CDC42P60953 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.21■□□□□ 0.19
CDC42P60953 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.21■□□□□ 0.19
CDC42P60953 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.21■□□□□ 0.19
CDC42P60953 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.21■□□□□ 0.19
CDC42P60953 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.21■□□□□ 0.19
CDC42P60953 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.21■□□□□ 0.19
CDC42P60953 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC42P60953 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.21■□□□□ 0.19
CDC42P60953 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.21■□□□□ 0.19
CDC42P60953 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDC42P60953 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.21■□□□□ 0.19
CDC42P60953 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CDC42P60953 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDC42P60953 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms