Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MCCD1P59942 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MCCD1P59942 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.94■□□□□ 0.62
MCCD1P59942 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MCCD1P59942 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.93■□□□□ 0.62
MCCD1P59942 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
MCCD1P59942 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
MCCD1P59942 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
MCCD1P59942 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.93■□□□□ 0.62
MCCD1P59942 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MCCD1P59942 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
MCCD1P59942 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.93■□□□□ 0.62
MCCD1P59942 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
MCCD1P59942 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MCCD1P59942 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MCCD1P59942 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MCCD1P59942 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MCCD1P59942 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MCCD1P59942 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MCCD1P59942 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MCCD1P59942 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MCCD1P59942 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MCCD1P59942 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.93■□□□□ 0.62
MCCD1P59942 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.93■□□□□ 0.62
MCCD1P59942 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MCCD1P59942 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.93■□□□□ 0.62
MCCD1P59942 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MCCD1P59942 AC099336.1-202ENST00000602961 463 ntBASIC18.93■□□□□ 0.62
MCCD1P59942 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.93■□□□□ 0.62
MCCD1P59942 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MCCD1P59942 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.93■□□□□ 0.62
MCCD1P59942 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.93■□□□□ 0.62
MCCD1P59942 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MCCD1P59942 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MCCD1P59942 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MCCD1P59942 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MCCD1P59942 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MCCD1P59942 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
MCCD1P59942 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.92■□□□□ 0.62
MCCD1P59942 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.92■□□□□ 0.62
MCCD1P59942 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MCCD1P59942 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
MCCD1P59942 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MCCD1P59942 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MCCD1P59942 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MCCD1P59942 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
MCCD1P59942 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.92■□□□□ 0.62
MCCD1P59942 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.92■□□□□ 0.62
MCCD1P59942 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.92■□□□□ 0.62
MCCD1P59942 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MCCD1P59942 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
MCCD1P59942 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MCCD1P59942 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.92■□□□□ 0.62
MCCD1P59942 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.92■□□□□ 0.62
MCCD1P59942 AC096582.2-201ENST00000510860 516 ntBASIC18.92■□□□□ 0.62
MCCD1P59942 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.92■□□□□ 0.62
MCCD1P59942 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
MCCD1P59942 AC073592.5-201ENST00000624854 528 ntBASIC18.92■□□□□ 0.62
MCCD1P59942 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.92■□□□□ 0.62
MCCD1P59942 AC046185.3-201ENST00000623228 1824 ntBASIC18.92■□□□□ 0.62
MCCD1P59942 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.92■□□□□ 0.62
MCCD1P59942 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.92■□□□□ 0.62
MCCD1P59942 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MCCD1P59942 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MCCD1P59942 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.92■□□□□ 0.62
MCCD1P59942 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
MCCD1P59942 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.92■□□□□ 0.62
MCCD1P59942 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MCCD1P59942 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MCCD1P59942 AP005117.1-201ENST00000584346 1413 ntBASIC18.91■□□□□ 0.62
MCCD1P59942 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.91■□□□□ 0.62
MCCD1P59942 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MCCD1P59942 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.91■□□□□ 0.62
MCCD1P59942 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
MCCD1P59942 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MCCD1P59942 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.91■□□□□ 0.62
MCCD1P59942 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MCCD1P59942 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
MCCD1P59942 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.91■□□□□ 0.62
MCCD1P59942 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
MCCD1P59942 SPDYE21P-201ENST00000413323 827 ntBASIC18.91■□□□□ 0.62
MCCD1P59942 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.91■□□□□ 0.62
MCCD1P59942 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
MCCD1P59942 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MCCD1P59942 AC093458.2-201ENST00000623150 629 ntBASIC18.91■□□□□ 0.62
MCCD1P59942 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
MCCD1P59942 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.91■□□□□ 0.62
MCCD1P59942 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MCCD1P59942 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MCCD1P59942 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MCCD1P59942 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
MCCD1P59942 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MCCD1P59942 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MCCD1P59942 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MCCD1P59942 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
MCCD1P59942 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.9■□□□□ 0.62
MCCD1P59942 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
MCCD1P59942 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MCCD1P59942 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.9■□□□□ 0.62
MCCD1P59942 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms